Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27878 | 83857;83858;83859 | chr2:178562500;178562499;178562498 | chr2:179427227;179427226;179427225 |
N2AB | 26237 | 78934;78935;78936 | chr2:178562500;178562499;178562498 | chr2:179427227;179427226;179427225 |
N2A | 25310 | 76153;76154;76155 | chr2:178562500;178562499;178562498 | chr2:179427227;179427226;179427225 |
N2B | 18813 | 56662;56663;56664 | chr2:178562500;178562499;178562498 | chr2:179427227;179427226;179427225 |
Novex-1 | 18938 | 57037;57038;57039 | chr2:178562500;178562499;178562498 | chr2:179427227;179427226;179427225 |
Novex-2 | 19005 | 57238;57239;57240 | chr2:178562500;178562499;178562498 | chr2:179427227;179427226;179427225 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.048 | N | 0.393 | 0.156 | 0.208816687407 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2651 | likely_benign | 0.2499 | benign | -0.653 | Destabilizing | 0.004 | N | 0.36 | neutral | None | None | None | None | N |
N/C | 0.3184 | likely_benign | 0.3046 | benign | 0.195 | Stabilizing | 0.863 | D | 0.48 | neutral | None | None | None | None | N |
N/D | 0.129 | likely_benign | 0.1438 | benign | -0.537 | Destabilizing | 0.048 | N | 0.393 | neutral | N | 0.461318797 | None | None | N |
N/E | 0.2894 | likely_benign | 0.3178 | benign | -0.558 | Destabilizing | 0.101 | N | 0.336 | neutral | None | None | None | None | N |
N/F | 0.5403 | ambiguous | 0.5255 | ambiguous | -1.014 | Destabilizing | 0.856 | D | 0.456 | neutral | None | None | None | None | N |
N/G | 0.3045 | likely_benign | 0.286 | benign | -0.836 | Destabilizing | 0.104 | N | 0.375 | neutral | None | None | None | None | N |
N/H | 0.1025 | likely_benign | 0.0989 | benign | -0.905 | Destabilizing | 0.001 | N | 0.136 | neutral | N | 0.475885605 | None | None | N |
N/I | 0.3333 | likely_benign | 0.3418 | ambiguous | -0.243 | Destabilizing | 0.454 | N | 0.467 | neutral | N | 0.487488484 | None | None | N |
N/K | 0.2232 | likely_benign | 0.2538 | benign | 0.015 | Stabilizing | 0.241 | N | 0.367 | neutral | N | 0.486139884 | None | None | N |
N/L | 0.2827 | likely_benign | 0.2826 | benign | -0.243 | Destabilizing | 0.239 | N | 0.424 | neutral | None | None | None | None | N |
N/M | 0.3016 | likely_benign | 0.2902 | benign | 0.473 | Stabilizing | 0.962 | D | 0.423 | neutral | None | None | None | None | N |
N/P | 0.8893 | likely_pathogenic | 0.8835 | pathogenic | -0.354 | Destabilizing | 0.191 | N | 0.444 | neutral | None | None | None | None | N |
N/Q | 0.2377 | likely_benign | 0.2426 | benign | -0.717 | Destabilizing | 0.524 | D | 0.413 | neutral | None | None | None | None | N |
N/R | 0.2706 | likely_benign | 0.2986 | benign | 0.187 | Stabilizing | 0.456 | N | 0.403 | neutral | None | None | None | None | N |
N/S | 0.0919 | likely_benign | 0.0879 | benign | -0.363 | Destabilizing | None | N | 0.16 | neutral | N | 0.421490972 | None | None | N |
N/T | 0.1117 | likely_benign | 0.1062 | benign | -0.241 | Destabilizing | 0.038 | N | 0.357 | neutral | N | 0.393320149 | None | None | N |
N/V | 0.3043 | likely_benign | 0.3065 | benign | -0.354 | Destabilizing | 0.084 | N | 0.449 | neutral | None | None | None | None | N |
N/W | 0.7372 | likely_pathogenic | 0.7381 | pathogenic | -0.88 | Destabilizing | 0.986 | D | 0.569 | neutral | None | None | None | None | N |
N/Y | 0.1705 | likely_benign | 0.1725 | benign | -0.627 | Destabilizing | 0.689 | D | 0.443 | neutral | N | 0.487488484 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.