Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27879 | 83860;83861;83862 | chr2:178562497;178562496;178562495 | chr2:179427224;179427223;179427222 |
N2AB | 26238 | 78937;78938;78939 | chr2:178562497;178562496;178562495 | chr2:179427224;179427223;179427222 |
N2A | 25311 | 76156;76157;76158 | chr2:178562497;178562496;178562495 | chr2:179427224;179427223;179427222 |
N2B | 18814 | 56665;56666;56667 | chr2:178562497;178562496;178562495 | chr2:179427224;179427223;179427222 |
Novex-1 | 18939 | 57040;57041;57042 | chr2:178562497;178562496;178562495 | chr2:179427224;179427223;179427222 |
Novex-2 | 19006 | 57241;57242;57243 | chr2:178562497;178562496;178562495 | chr2:179427224;179427223;179427222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.984 | N | 0.684 | 0.317 | 0.414930877219 | gnomAD-4.0.0 | 2.05367E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1418 | likely_benign | 0.1423 | benign | -0.613 | Destabilizing | 0.64 | D | 0.434 | neutral | N | 0.506533799 | None | None | N |
T/C | 0.5067 | ambiguous | 0.507 | ambiguous | -0.952 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
T/D | 0.6234 | likely_pathogenic | 0.648 | pathogenic | -1.87 | Destabilizing | 0.919 | D | 0.632 | neutral | None | None | None | None | N |
T/E | 0.5302 | ambiguous | 0.5815 | pathogenic | -1.83 | Destabilizing | 0.919 | D | 0.626 | neutral | None | None | None | None | N |
T/F | 0.398 | ambiguous | 0.4189 | ambiguous | -1.012 | Destabilizing | 0.996 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/G | 0.3355 | likely_benign | 0.3241 | benign | -0.838 | Destabilizing | 0.851 | D | 0.575 | neutral | None | None | None | None | N |
T/H | 0.3267 | likely_benign | 0.3477 | ambiguous | -1.243 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
T/I | 0.5229 | ambiguous | 0.5697 | pathogenic | -0.101 | Destabilizing | 0.984 | D | 0.684 | prob.neutral | N | 0.490464225 | None | None | N |
T/K | 0.4004 | ambiguous | 0.4499 | ambiguous | -0.671 | Destabilizing | 0.896 | D | 0.629 | neutral | N | 0.471559822 | None | None | N |
T/L | 0.2287 | likely_benign | 0.2413 | benign | -0.101 | Destabilizing | 0.919 | D | 0.579 | neutral | None | None | None | None | N |
T/M | 0.1261 | likely_benign | 0.1313 | benign | 0.149 | Stabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
T/N | 0.2264 | likely_benign | 0.2339 | benign | -1.109 | Destabilizing | 0.919 | D | 0.538 | neutral | None | None | None | None | N |
T/P | 0.8998 | likely_pathogenic | 0.925 | pathogenic | -0.242 | Destabilizing | 0.984 | D | 0.682 | prob.neutral | N | 0.513176836 | None | None | N |
T/Q | 0.3592 | ambiguous | 0.3916 | ambiguous | -1.366 | Destabilizing | 0.988 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/R | 0.3206 | likely_benign | 0.3781 | ambiguous | -0.409 | Destabilizing | 0.968 | D | 0.691 | prob.neutral | D | 0.525562277 | None | None | N |
T/S | 0.0986 | likely_benign | 0.0915 | benign | -1.108 | Destabilizing | 0.046 | N | 0.201 | neutral | N | 0.374712959 | None | None | N |
T/V | 0.3658 | ambiguous | 0.3925 | ambiguous | -0.242 | Destabilizing | 0.919 | D | 0.515 | neutral | None | None | None | None | N |
T/W | 0.7199 | likely_pathogenic | 0.7474 | pathogenic | -1.115 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/Y | 0.3956 | ambiguous | 0.4163 | ambiguous | -0.695 | Destabilizing | 0.996 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.