Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27880 | 83863;83864;83865 | chr2:178562494;178562493;178562492 | chr2:179427221;179427220;179427219 |
N2AB | 26239 | 78940;78941;78942 | chr2:178562494;178562493;178562492 | chr2:179427221;179427220;179427219 |
N2A | 25312 | 76159;76160;76161 | chr2:178562494;178562493;178562492 | chr2:179427221;179427220;179427219 |
N2B | 18815 | 56668;56669;56670 | chr2:178562494;178562493;178562492 | chr2:179427221;179427220;179427219 |
Novex-1 | 18940 | 57043;57044;57045 | chr2:178562494;178562493;178562492 | chr2:179427221;179427220;179427219 |
Novex-2 | 19007 | 57244;57245;57246 | chr2:178562494;178562493;178562492 | chr2:179427221;179427220;179427219 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1319675982 | -1.668 | 0.978 | N | 0.637 | 0.263 | 0.388970301349 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
A/T | rs1319675982 | -1.668 | 0.978 | N | 0.637 | 0.263 | 0.388970301349 | gnomAD-4.0.0 | 1.369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32369E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5939 | likely_pathogenic | 0.62 | pathogenic | -1.834 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/D | 0.9916 | likely_pathogenic | 0.9938 | pathogenic | -2.382 | Highly Destabilizing | 0.999 | D | 0.792 | deleterious | N | 0.510530263 | None | None | N |
A/E | 0.9787 | likely_pathogenic | 0.9844 | pathogenic | -2.15 | Highly Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
A/F | 0.899 | likely_pathogenic | 0.9222 | pathogenic | -0.804 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
A/G | 0.497 | ambiguous | 0.4998 | ambiguous | -1.62 | Destabilizing | 0.996 | D | 0.627 | neutral | N | 0.4751939 | None | None | N |
A/H | 0.9892 | likely_pathogenic | 0.9923 | pathogenic | -2.069 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
A/I | 0.3756 | ambiguous | 0.4298 | ambiguous | 0.294 | Stabilizing | 0.967 | D | 0.662 | neutral | None | None | None | None | N |
A/K | 0.9921 | likely_pathogenic | 0.9948 | pathogenic | -1.179 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
A/L | 0.4678 | ambiguous | 0.5155 | ambiguous | 0.294 | Stabilizing | 0.923 | D | 0.633 | neutral | None | None | None | None | N |
A/M | 0.5609 | ambiguous | 0.6227 | pathogenic | -0.339 | Destabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | N |
A/N | 0.967 | likely_pathogenic | 0.9746 | pathogenic | -1.65 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
A/P | 0.9815 | likely_pathogenic | 0.9867 | pathogenic | -0.129 | Destabilizing | 0.999 | D | 0.789 | deleterious | N | 0.510276774 | None | None | N |
A/Q | 0.9685 | likely_pathogenic | 0.9767 | pathogenic | -1.391 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
A/R | 0.9798 | likely_pathogenic | 0.9859 | pathogenic | -1.399 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
A/S | 0.3062 | likely_benign | 0.3287 | benign | -2.13 | Highly Destabilizing | 0.989 | D | 0.625 | neutral | N | 0.487310674 | None | None | N |
A/T | 0.2077 | likely_benign | 0.2304 | benign | -1.742 | Destabilizing | 0.978 | D | 0.637 | neutral | N | 0.486803695 | None | None | N |
A/V | 0.1373 | likely_benign | 0.1616 | benign | -0.129 | Destabilizing | 0.198 | N | 0.318 | neutral | N | 0.369848644 | None | None | N |
A/W | 0.9936 | likely_pathogenic | 0.9956 | pathogenic | -1.512 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
A/Y | 0.9727 | likely_pathogenic | 0.9803 | pathogenic | -0.953 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.