Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27894 | 83905;83906;83907 | chr2:178562452;178562451;178562450 | chr2:179427179;179427178;179427177 |
N2AB | 26253 | 78982;78983;78984 | chr2:178562452;178562451;178562450 | chr2:179427179;179427178;179427177 |
N2A | 25326 | 76201;76202;76203 | chr2:178562452;178562451;178562450 | chr2:179427179;179427178;179427177 |
N2B | 18829 | 56710;56711;56712 | chr2:178562452;178562451;178562450 | chr2:179427179;179427178;179427177 |
Novex-1 | 18954 | 57085;57086;57087 | chr2:178562452;178562451;178562450 | chr2:179427179;179427178;179427177 |
Novex-2 | 19021 | 57286;57287;57288 | chr2:178562452;178562451;178562450 | chr2:179427179;179427178;179427177 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs753572520 | 0.41 | 0.983 | N | 0.664 | 0.286 | 0.253726318573 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66113E-04 |
K/Q | rs753572520 | 0.41 | 0.983 | N | 0.664 | 0.286 | 0.253726318573 | gnomAD-4.0.0 | 1.59252E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6867 | likely_pathogenic | 0.7962 | pathogenic | -0.002 | Destabilizing | 0.916 | D | 0.588 | neutral | None | None | None | None | N |
K/C | 0.8446 | likely_pathogenic | 0.892 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/D | 0.9179 | likely_pathogenic | 0.9564 | pathogenic | 0.136 | Stabilizing | 0.987 | D | 0.595 | neutral | None | None | None | None | N |
K/E | 0.6462 | likely_pathogenic | 0.7919 | pathogenic | 0.142 | Stabilizing | 0.892 | D | 0.553 | neutral | N | 0.465260392 | None | None | N |
K/F | 0.9305 | likely_pathogenic | 0.9558 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
K/G | 0.7988 | likely_pathogenic | 0.8798 | pathogenic | -0.207 | Destabilizing | 0.975 | D | 0.543 | neutral | None | None | None | None | N |
K/H | 0.5151 | ambiguous | 0.5995 | pathogenic | -0.523 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
K/I | 0.6516 | likely_pathogenic | 0.7435 | pathogenic | 0.457 | Stabilizing | 0.983 | D | 0.668 | neutral | N | 0.471648727 | None | None | N |
K/L | 0.663 | likely_pathogenic | 0.7539 | pathogenic | 0.457 | Stabilizing | 0.975 | D | 0.541 | neutral | None | None | None | None | N |
K/M | 0.5735 | likely_pathogenic | 0.6891 | pathogenic | 0.315 | Stabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
K/N | 0.8411 | likely_pathogenic | 0.9094 | pathogenic | 0.323 | Stabilizing | 0.983 | D | 0.655 | neutral | N | 0.466773655 | None | None | N |
K/P | 0.7383 | likely_pathogenic | 0.8237 | pathogenic | 0.333 | Stabilizing | 0.033 | N | 0.469 | neutral | None | None | None | None | N |
K/Q | 0.3363 | likely_benign | 0.4439 | ambiguous | 0.13 | Stabilizing | 0.983 | D | 0.664 | neutral | N | 0.515729285 | None | None | N |
K/R | 0.0695 | likely_benign | 0.0687 | benign | 0.022 | Stabilizing | 0.944 | D | 0.529 | neutral | N | 0.438847369 | None | None | N |
K/S | 0.8281 | likely_pathogenic | 0.903 | pathogenic | -0.191 | Destabilizing | 0.916 | D | 0.577 | neutral | None | None | None | None | N |
K/T | 0.5845 | likely_pathogenic | 0.7163 | pathogenic | -0.033 | Destabilizing | 0.967 | D | 0.581 | neutral | N | 0.502626702 | None | None | N |
K/V | 0.5903 | likely_pathogenic | 0.6914 | pathogenic | 0.333 | Stabilizing | 0.987 | D | 0.605 | neutral | None | None | None | None | N |
K/W | 0.8818 | likely_pathogenic | 0.9109 | pathogenic | -0.217 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Y | 0.8315 | likely_pathogenic | 0.8815 | pathogenic | 0.142 | Stabilizing | 0.996 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.