Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27902 | 83929;83930;83931 | chr2:178562428;178562427;178562426 | chr2:179427155;179427154;179427153 |
N2AB | 26261 | 79006;79007;79008 | chr2:178562428;178562427;178562426 | chr2:179427155;179427154;179427153 |
N2A | 25334 | 76225;76226;76227 | chr2:178562428;178562427;178562426 | chr2:179427155;179427154;179427153 |
N2B | 18837 | 56734;56735;56736 | chr2:178562428;178562427;178562426 | chr2:179427155;179427154;179427153 |
Novex-1 | 18962 | 57109;57110;57111 | chr2:178562428;178562427;178562426 | chr2:179427155;179427154;179427153 |
Novex-2 | 19029 | 57310;57311;57312 | chr2:178562428;178562427;178562426 | chr2:179427155;179427154;179427153 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.918 | N | 0.605 | 0.28 | 0.534955811369 | gnomAD-4.0.0 | 1.59314E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86018E-06 | 0 | 0 |
M/T | None | None | 0.9 | N | 0.588 | 0.358 | 0.635205937663 | gnomAD-4.0.0 | 1.59284E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85995E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.8396 | likely_pathogenic | 0.8621 | pathogenic | -1.976 | Destabilizing | 0.942 | D | 0.54 | neutral | None | None | None | None | N |
M/C | 0.8427 | likely_pathogenic | 0.8508 | pathogenic | -1.705 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
M/D | 0.9958 | likely_pathogenic | 0.996 | pathogenic | -1.453 | Destabilizing | 0.988 | D | 0.735 | prob.delet. | None | None | None | None | N |
M/E | 0.9434 | likely_pathogenic | 0.9518 | pathogenic | -1.188 | Destabilizing | 0.828 | D | 0.627 | neutral | None | None | None | None | N |
M/F | 0.47 | ambiguous | 0.4876 | ambiguous | -0.589 | Destabilizing | 0.976 | D | 0.617 | neutral | None | None | None | None | N |
M/G | 0.9293 | likely_pathogenic | 0.9336 | pathogenic | -2.502 | Highly Destabilizing | 0.975 | D | 0.669 | neutral | None | None | None | None | N |
M/H | 0.8817 | likely_pathogenic | 0.8929 | pathogenic | -2.222 | Highly Destabilizing | 0.992 | D | 0.709 | prob.delet. | None | None | None | None | N |
M/I | 0.7194 | likely_pathogenic | 0.7665 | pathogenic | -0.455 | Destabilizing | 0.918 | D | 0.605 | neutral | N | 0.495140582 | None | None | N |
M/K | 0.462 | ambiguous | 0.5227 | ambiguous | -0.852 | Destabilizing | 0.735 | D | 0.572 | neutral | N | 0.47430395 | None | None | N |
M/L | 0.3047 | likely_benign | 0.3529 | ambiguous | -0.455 | Destabilizing | 0.499 | N | 0.454 | neutral | N | 0.515745141 | None | None | N |
M/N | 0.9382 | likely_pathogenic | 0.945 | pathogenic | -1.309 | Destabilizing | 0.977 | D | 0.701 | prob.neutral | None | None | None | None | N |
M/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -0.945 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | N |
M/Q | 0.6239 | likely_pathogenic | 0.6511 | pathogenic | -0.9 | Destabilizing | 0.943 | D | 0.612 | neutral | None | None | None | None | N |
M/R | 0.5505 | ambiguous | 0.6163 | pathogenic | -1.2 | Destabilizing | 0.036 | N | 0.386 | neutral | N | 0.46889813 | None | None | N |
M/S | 0.8718 | likely_pathogenic | 0.8788 | pathogenic | -1.912 | Destabilizing | 0.975 | D | 0.604 | neutral | None | None | None | None | N |
M/T | 0.7668 | likely_pathogenic | 0.8027 | pathogenic | -1.496 | Destabilizing | 0.9 | D | 0.588 | neutral | N | 0.473050625 | None | None | N |
M/V | 0.3003 | likely_benign | 0.3387 | benign | -0.945 | Destabilizing | 0.912 | D | 0.577 | neutral | N | 0.509819246 | None | None | N |
M/W | 0.8581 | likely_pathogenic | 0.8726 | pathogenic | -0.897 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
M/Y | 0.7038 | likely_pathogenic | 0.7225 | pathogenic | -0.844 | Destabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.