Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27904 | 83935;83936;83937 | chr2:178562422;178562421;178562420 | chr2:179427149;179427148;179427147 |
N2AB | 26263 | 79012;79013;79014 | chr2:178562422;178562421;178562420 | chr2:179427149;179427148;179427147 |
N2A | 25336 | 76231;76232;76233 | chr2:178562422;178562421;178562420 | chr2:179427149;179427148;179427147 |
N2B | 18839 | 56740;56741;56742 | chr2:178562422;178562421;178562420 | chr2:179427149;179427148;179427147 |
Novex-1 | 18964 | 57115;57116;57117 | chr2:178562422;178562421;178562420 | chr2:179427149;179427148;179427147 |
Novex-2 | 19031 | 57316;57317;57318 | chr2:178562422;178562421;178562420 | chr2:179427149;179427148;179427147 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1320086002 | -0.98 | 0.045 | N | 0.296 | 0.093 | 0.139678290688 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.97E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1320086002 | -0.98 | 0.045 | N | 0.296 | 0.093 | 0.139678290688 | gnomAD-4.0.0 | 1.59303E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02627E-05 |
T/I | rs1704030695 | None | 0.62 | N | 0.384 | 0.174 | 0.245101548738 | gnomAD-4.0.0 | 3.18637E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.55772E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0726 | likely_benign | 0.0761 | benign | -0.969 | Destabilizing | 0.045 | N | 0.296 | neutral | N | 0.41858674 | None | None | N |
T/C | 0.3515 | ambiguous | 0.3802 | ambiguous | -0.593 | Destabilizing | 0.996 | D | 0.413 | neutral | None | None | None | None | N |
T/D | 0.4741 | ambiguous | 0.5255 | ambiguous | -0.118 | Destabilizing | 0.481 | N | 0.401 | neutral | None | None | None | None | N |
T/E | 0.3084 | likely_benign | 0.354 | ambiguous | -0.107 | Destabilizing | 0.755 | D | 0.355 | neutral | None | None | None | None | N |
T/F | 0.2722 | likely_benign | 0.3354 | benign | -1.027 | Destabilizing | 0.976 | D | 0.502 | neutral | None | None | None | None | N |
T/G | 0.1821 | likely_benign | 0.1926 | benign | -1.234 | Destabilizing | 0.795 | D | 0.448 | neutral | None | None | None | None | N |
T/H | 0.2494 | likely_benign | 0.2846 | benign | -1.467 | Destabilizing | 0.997 | D | 0.456 | neutral | None | None | None | None | N |
T/I | 0.1591 | likely_benign | 0.1942 | benign | -0.348 | Destabilizing | 0.62 | D | 0.384 | neutral | N | 0.481848785 | None | None | N |
T/K | 0.1605 | likely_benign | 0.1757 | benign | -0.709 | Destabilizing | 0.812 | D | 0.345 | neutral | None | None | None | None | N |
T/L | 0.0841 | likely_benign | 0.0949 | benign | -0.348 | Destabilizing | 0.013 | N | 0.123 | neutral | None | None | None | None | N |
T/M | 0.0755 | likely_benign | 0.0814 | benign | -0.056 | Destabilizing | 0.938 | D | 0.438 | neutral | None | None | None | None | N |
T/N | 0.1206 | likely_benign | 0.1365 | benign | -0.647 | Destabilizing | 0.412 | N | 0.378 | neutral | N | 0.469052846 | None | None | N |
T/P | 0.0736 | likely_benign | 0.0755 | benign | -0.523 | Destabilizing | 0.001 | N | 0.111 | neutral | N | 0.41389021 | None | None | N |
T/Q | 0.1833 | likely_benign | 0.1952 | benign | -0.8 | Destabilizing | 0.935 | D | 0.445 | neutral | None | None | None | None | N |
T/R | 0.1501 | likely_benign | 0.1676 | benign | -0.498 | Destabilizing | 0.976 | D | 0.435 | neutral | None | None | None | None | N |
T/S | 0.1102 | likely_benign | 0.1188 | benign | -0.987 | Destabilizing | 0.003 | N | 0.101 | neutral | N | 0.404252006 | None | None | N |
T/V | 0.1229 | likely_benign | 0.1418 | benign | -0.523 | Destabilizing | 0.04 | N | 0.11 | neutral | None | None | None | None | N |
T/W | 0.6028 | likely_pathogenic | 0.6586 | pathogenic | -0.918 | Destabilizing | 0.999 | D | 0.51 | neutral | None | None | None | None | N |
T/Y | 0.2995 | likely_benign | 0.3558 | ambiguous | -0.699 | Destabilizing | 0.988 | D | 0.496 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.