Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27912 | 83959;83960;83961 | chr2:178562398;178562397;178562396 | chr2:179427125;179427124;179427123 |
N2AB | 26271 | 79036;79037;79038 | chr2:178562398;178562397;178562396 | chr2:179427125;179427124;179427123 |
N2A | 25344 | 76255;76256;76257 | chr2:178562398;178562397;178562396 | chr2:179427125;179427124;179427123 |
N2B | 18847 | 56764;56765;56766 | chr2:178562398;178562397;178562396 | chr2:179427125;179427124;179427123 |
Novex-1 | 18972 | 57139;57140;57141 | chr2:178562398;178562397;178562396 | chr2:179427125;179427124;179427123 |
Novex-2 | 19039 | 57340;57341;57342 | chr2:178562398;178562397;178562396 | chr2:179427125;179427124;179427123 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1704019364 | None | None | N | 0.219 | 0.116 | 0.241078983079 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1704019364 | None | None | N | 0.219 | 0.116 | 0.241078983079 | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | N | None | 0 | 6.55136E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.061 | likely_benign | 0.0629 | benign | -0.661 | Destabilizing | None | N | 0.13 | neutral | N | 0.455739619 | None | None | N |
T/C | 0.2471 | likely_benign | 0.2667 | benign | -0.309 | Destabilizing | 0.261 | N | 0.471 | neutral | None | None | None | None | N |
T/D | 0.3049 | likely_benign | 0.3562 | ambiguous | -0.417 | Destabilizing | 0.007 | N | 0.482 | neutral | None | None | None | None | N |
T/E | 0.2361 | likely_benign | 0.2732 | benign | -0.46 | Destabilizing | None | N | 0.237 | neutral | None | None | None | None | N |
T/F | 0.1262 | likely_benign | 0.1438 | benign | -0.873 | Destabilizing | 0.151 | N | 0.588 | neutral | None | None | None | None | N |
T/G | 0.178 | likely_benign | 0.1909 | benign | -0.872 | Destabilizing | 0.024 | N | 0.454 | neutral | None | None | None | None | N |
T/H | 0.1895 | likely_benign | 0.2055 | benign | -1.171 | Destabilizing | 0.322 | N | 0.515 | neutral | None | None | None | None | N |
T/I | 0.0705 | likely_benign | 0.0764 | benign | -0.201 | Destabilizing | None | N | 0.219 | neutral | N | 0.494759367 | None | None | N |
T/K | 0.1912 | likely_benign | 0.2224 | benign | -0.735 | Destabilizing | 0.014 | N | 0.479 | neutral | None | None | None | None | N |
T/L | 0.0565 | likely_benign | 0.0589 | benign | -0.201 | Destabilizing | None | N | 0.185 | neutral | None | None | None | None | N |
T/M | 0.0718 | likely_benign | 0.0752 | benign | 0.208 | Stabilizing | 0.001 | N | 0.301 | neutral | None | None | None | None | N |
T/N | 0.092 | likely_benign | 0.1001 | benign | -0.532 | Destabilizing | 0.011 | N | 0.33 | neutral | N | 0.50018383 | None | None | N |
T/P | 0.0779 | likely_benign | 0.0808 | benign | -0.324 | Destabilizing | 0.011 | N | 0.49 | neutral | N | 0.462993665 | None | None | N |
T/Q | 0.1796 | likely_benign | 0.2004 | benign | -0.804 | Destabilizing | 0.015 | N | 0.536 | neutral | None | None | None | None | N |
T/R | 0.1581 | likely_benign | 0.1892 | benign | -0.371 | Destabilizing | 0.151 | N | 0.491 | neutral | None | None | None | None | N |
T/S | 0.0837 | likely_benign | 0.0888 | benign | -0.748 | Destabilizing | 0.001 | N | 0.352 | neutral | N | 0.448773574 | None | None | N |
T/V | 0.0655 | likely_benign | 0.0687 | benign | -0.324 | Destabilizing | None | N | 0.125 | neutral | None | None | None | None | N |
T/W | 0.4509 | ambiguous | 0.4999 | ambiguous | -0.814 | Destabilizing | 0.936 | D | 0.515 | neutral | None | None | None | None | N |
T/Y | 0.1757 | likely_benign | 0.1991 | benign | -0.593 | Destabilizing | 0.559 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.