Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27918 | 83977;83978;83979 | chr2:178562380;178562379;178562378 | chr2:179427107;179427106;179427105 |
N2AB | 26277 | 79054;79055;79056 | chr2:178562380;178562379;178562378 | chr2:179427107;179427106;179427105 |
N2A | 25350 | 76273;76274;76275 | chr2:178562380;178562379;178562378 | chr2:179427107;179427106;179427105 |
N2B | 18853 | 56782;56783;56784 | chr2:178562380;178562379;178562378 | chr2:179427107;179427106;179427105 |
Novex-1 | 18978 | 57157;57158;57159 | chr2:178562380;178562379;178562378 | chr2:179427107;179427106;179427105 |
Novex-2 | 19045 | 57358;57359;57360 | chr2:178562380;178562379;178562378 | chr2:179427107;179427106;179427105 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.309 | N | 0.309 | 0.106 | 0.168933306366 | gnomAD-4.0.0 | 1.59739E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.865E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0725 | likely_benign | 0.0773 | benign | -0.849 | Destabilizing | 0.012 | N | 0.073 | neutral | N | 0.407372456 | None | None | N |
T/C | 0.3058 | likely_benign | 0.3572 | ambiguous | -0.62 | Destabilizing | 0.996 | D | 0.376 | neutral | None | None | None | None | N |
T/D | 0.3639 | ambiguous | 0.4 | ambiguous | -0.318 | Destabilizing | 0.953 | D | 0.384 | neutral | None | None | None | None | N |
T/E | 0.3525 | ambiguous | 0.3984 | ambiguous | -0.225 | Destabilizing | 0.854 | D | 0.367 | neutral | None | None | None | None | N |
T/F | 0.1708 | likely_benign | 0.2059 | benign | -1.013 | Destabilizing | 0.91 | D | 0.403 | neutral | None | None | None | None | N |
T/G | 0.1594 | likely_benign | 0.1697 | benign | -1.118 | Destabilizing | 0.59 | D | 0.343 | neutral | None | None | None | None | N |
T/H | 0.2426 | likely_benign | 0.2726 | benign | -0.994 | Destabilizing | 0.996 | D | 0.392 | neutral | None | None | None | None | N |
T/I | 0.1279 | likely_benign | 0.1632 | benign | -0.194 | Destabilizing | 0.003 | N | 0.157 | neutral | N | 0.492356567 | None | None | N |
T/K | 0.3015 | likely_benign | 0.3353 | benign | -0.293 | Destabilizing | 0.742 | D | 0.374 | neutral | None | None | None | None | N |
T/L | 0.0766 | likely_benign | 0.0914 | benign | -0.194 | Destabilizing | 0.17 | N | 0.371 | neutral | None | None | None | None | N |
T/M | 0.0682 | likely_benign | 0.0762 | benign | -0.388 | Destabilizing | 0.91 | D | 0.384 | neutral | None | None | None | None | N |
T/N | 0.0828 | likely_benign | 0.089 | benign | -0.651 | Destabilizing | 0.979 | D | 0.367 | neutral | N | 0.482118144 | None | None | N |
T/P | 0.3122 | likely_benign | 0.3264 | benign | -0.384 | Destabilizing | 0.939 | D | 0.4 | neutral | N | 0.501570696 | None | None | N |
T/Q | 0.2497 | likely_benign | 0.2745 | benign | -0.597 | Destabilizing | 0.984 | D | 0.403 | neutral | None | None | None | None | N |
T/R | 0.278 | likely_benign | 0.3108 | benign | -0.135 | Destabilizing | 0.953 | D | 0.401 | neutral | None | None | None | None | N |
T/S | 0.0857 | likely_benign | 0.0885 | benign | -0.963 | Destabilizing | 0.309 | N | 0.309 | neutral | N | 0.43409491 | None | None | N |
T/V | 0.0962 | likely_benign | 0.1177 | benign | -0.384 | Destabilizing | 0.17 | N | 0.293 | neutral | None | None | None | None | N |
T/W | 0.5731 | likely_pathogenic | 0.6273 | pathogenic | -1.094 | Destabilizing | 0.996 | D | 0.445 | neutral | None | None | None | None | N |
T/Y | 0.2259 | likely_benign | 0.2651 | benign | -0.735 | Destabilizing | 0.953 | D | 0.405 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.