Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27921 | 83986;83987;83988 | chr2:178562371;178562370;178562369 | chr2:179427098;179427097;179427096 |
N2AB | 26280 | 79063;79064;79065 | chr2:178562371;178562370;178562369 | chr2:179427098;179427097;179427096 |
N2A | 25353 | 76282;76283;76284 | chr2:178562371;178562370;178562369 | chr2:179427098;179427097;179427096 |
N2B | 18856 | 56791;56792;56793 | chr2:178562371;178562370;178562369 | chr2:179427098;179427097;179427096 |
Novex-1 | 18981 | 57166;57167;57168 | chr2:178562371;178562370;178562369 | chr2:179427098;179427097;179427096 |
Novex-2 | 19048 | 57367;57368;57369 | chr2:178562371;178562370;178562369 | chr2:179427098;179427097;179427096 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.842 | N | 0.59 | 0.194 | 0.364342057095 | gnomAD-4.0.0 | 1.60033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86867E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5727 | likely_pathogenic | 0.567 | pathogenic | -0.704 | Destabilizing | 0.996 | D | 0.793 | deleterious | None | None | None | None | N |
A/D | 0.8603 | likely_pathogenic | 0.8401 | pathogenic | -1.132 | Destabilizing | 0.973 | D | 0.816 | deleterious | None | None | None | None | N |
A/E | 0.8127 | likely_pathogenic | 0.7941 | pathogenic | -1.038 | Destabilizing | 0.974 | D | 0.753 | deleterious | N | 0.520583122 | None | None | N |
A/F | 0.685 | likely_pathogenic | 0.7021 | pathogenic | -0.543 | Destabilizing | 0.996 | D | 0.881 | deleterious | None | None | None | None | N |
A/G | 0.1737 | likely_benign | 0.1831 | benign | -1.027 | Destabilizing | 0.426 | N | 0.569 | neutral | N | 0.472764817 | None | None | N |
A/H | 0.8742 | likely_pathogenic | 0.8675 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
A/I | 0.6183 | likely_pathogenic | 0.6052 | pathogenic | 0.308 | Stabilizing | 0.985 | D | 0.804 | deleterious | None | None | None | None | N |
A/K | 0.9217 | likely_pathogenic | 0.917 | pathogenic | -0.816 | Destabilizing | 0.993 | D | 0.763 | deleterious | None | None | None | None | N |
A/L | 0.545 | ambiguous | 0.5352 | ambiguous | 0.308 | Stabilizing | 0.95 | D | 0.662 | neutral | None | None | None | None | N |
A/M | 0.4648 | ambiguous | 0.4705 | ambiguous | 0.106 | Stabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
A/N | 0.7205 | likely_pathogenic | 0.7266 | pathogenic | -0.821 | Destabilizing | 0.806 | D | 0.831 | deleterious | None | None | None | None | N |
A/P | 0.991 | likely_pathogenic | 0.9896 | pathogenic | 0.037 | Stabilizing | 0.982 | D | 0.798 | deleterious | N | 0.520583122 | None | None | N |
A/Q | 0.8365 | likely_pathogenic | 0.8244 | pathogenic | -0.766 | Destabilizing | 0.996 | D | 0.856 | deleterious | None | None | None | None | N |
A/R | 0.9053 | likely_pathogenic | 0.9014 | pathogenic | -0.814 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | N |
A/S | 0.1868 | likely_benign | 0.1856 | benign | -1.255 | Destabilizing | 0.22 | N | 0.516 | neutral | N | 0.490615583 | None | None | N |
A/T | 0.1515 | likely_benign | 0.1438 | benign | -1.039 | Destabilizing | 0.035 | N | 0.404 | neutral | N | 0.492161779 | None | None | N |
A/V | 0.3021 | likely_benign | 0.2862 | benign | 0.037 | Stabilizing | 0.842 | D | 0.59 | neutral | N | 0.482075284 | None | None | N |
A/W | 0.954 | likely_pathogenic | 0.956 | pathogenic | -1.145 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
A/Y | 0.7846 | likely_pathogenic | 0.8088 | pathogenic | -0.568 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.