Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27930 | 84013;84014;84015 | chr2:178562344;178562343;178562342 | chr2:179427071;179427070;179427069 |
N2AB | 26289 | 79090;79091;79092 | chr2:178562344;178562343;178562342 | chr2:179427071;179427070;179427069 |
N2A | 25362 | 76309;76310;76311 | chr2:178562344;178562343;178562342 | chr2:179427071;179427070;179427069 |
N2B | 18865 | 56818;56819;56820 | chr2:178562344;178562343;178562342 | chr2:179427071;179427070;179427069 |
Novex-1 | 18990 | 57193;57194;57195 | chr2:178562344;178562343;178562342 | chr2:179427071;179427070;179427069 |
Novex-2 | 19057 | 57394;57395;57396 | chr2:178562344;178562343;178562342 | chr2:179427071;179427070;179427069 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs901577328 | None | 0.91 | N | 0.601 | 0.396 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs901577328 | None | 0.91 | N | 0.601 | 0.396 | None | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46994E-05 | 0 | 0 |
E/K | rs1225134445 | -0.758 | 0.919 | N | 0.477 | 0.32 | 0.279370189704 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 0 |
E/K | rs1225134445 | -0.758 | 0.919 | N | 0.477 | 0.32 | 0.279370189704 | gnomAD-4.0.0 | 9.58797E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89222E-05 | 0 | 1.43303E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2102 | likely_benign | 0.2323 | benign | -0.917 | Destabilizing | 0.859 | D | 0.564 | neutral | N | 0.482192715 | None | None | N |
E/C | 0.8757 | likely_pathogenic | 0.8962 | pathogenic | -0.462 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/D | 0.21 | likely_benign | 0.2387 | benign | -0.977 | Destabilizing | 0.14 | N | 0.481 | neutral | N | 0.514729208 | None | None | N |
E/F | 0.8476 | likely_pathogenic | 0.8801 | pathogenic | -0.273 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/G | 0.2119 | likely_benign | 0.2282 | benign | -1.279 | Destabilizing | 0.91 | D | 0.601 | neutral | N | 0.482483503 | None | None | N |
E/H | 0.5828 | likely_pathogenic | 0.6341 | pathogenic | -0.464 | Destabilizing | 0.987 | D | 0.664 | neutral | None | None | None | None | N |
E/I | 0.4956 | ambiguous | 0.5616 | ambiguous | 0.069 | Stabilizing | 0.98 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/K | 0.1763 | likely_benign | 0.2047 | benign | -0.563 | Destabilizing | 0.919 | D | 0.477 | neutral | N | 0.454256752 | None | None | N |
E/L | 0.5303 | ambiguous | 0.5902 | pathogenic | 0.069 | Stabilizing | 0.98 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/M | 0.4906 | ambiguous | 0.5401 | ambiguous | 0.487 | Stabilizing | 0.99 | D | 0.673 | neutral | None | None | None | None | N |
E/N | 0.3237 | likely_benign | 0.3666 | ambiguous | -1.068 | Destabilizing | 0.023 | N | 0.298 | neutral | None | None | None | None | N |
E/P | 0.9604 | likely_pathogenic | 0.9697 | pathogenic | -0.239 | Destabilizing | 0.958 | D | 0.641 | neutral | None | None | None | None | N |
E/Q | 0.1449 | likely_benign | 0.156 | benign | -0.932 | Destabilizing | 0.966 | D | 0.659 | neutral | N | 0.464473746 | None | None | N |
E/R | 0.3221 | likely_benign | 0.3683 | ambiguous | -0.23 | Destabilizing | 0.981 | D | 0.675 | neutral | None | None | None | None | N |
E/S | 0.2483 | likely_benign | 0.2768 | benign | -1.369 | Destabilizing | 0.802 | D | 0.49 | neutral | None | None | None | None | N |
E/T | 0.2655 | likely_benign | 0.3112 | benign | -1.068 | Destabilizing | 0.975 | D | 0.645 | neutral | None | None | None | None | N |
E/V | 0.2944 | likely_benign | 0.3316 | benign | -0.239 | Destabilizing | 0.964 | D | 0.684 | prob.neutral | N | 0.466724617 | None | None | N |
E/W | 0.9492 | likely_pathogenic | 0.9652 | pathogenic | 0.033 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/Y | 0.7456 | likely_pathogenic | 0.7938 | pathogenic | -0.01 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.