Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27935 | 84028;84029;84030 | chr2:178562329;178562328;178562327 | chr2:179427056;179427055;179427054 |
N2AB | 26294 | 79105;79106;79107 | chr2:178562329;178562328;178562327 | chr2:179427056;179427055;179427054 |
N2A | 25367 | 76324;76325;76326 | chr2:178562329;178562328;178562327 | chr2:179427056;179427055;179427054 |
N2B | 18870 | 56833;56834;56835 | chr2:178562329;178562328;178562327 | chr2:179427056;179427055;179427054 |
Novex-1 | 18995 | 57208;57209;57210 | chr2:178562329;178562328;178562327 | chr2:179427056;179427055;179427054 |
Novex-2 | 19062 | 57409;57410;57411 | chr2:178562329;178562328;178562327 | chr2:179427056;179427055;179427054 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.946 | N | 0.617 | 0.422 | 0.392702134506 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8663 | likely_pathogenic | 0.8966 | pathogenic | -1.542 | Destabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | N |
R/C | 0.3442 | ambiguous | 0.4123 | ambiguous | -1.532 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/D | 0.9911 | likely_pathogenic | 0.9931 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
R/E | 0.876 | likely_pathogenic | 0.8964 | pathogenic | -0.631 | Destabilizing | 0.993 | D | 0.578 | neutral | None | None | None | None | N |
R/F | 0.9369 | likely_pathogenic | 0.9613 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
R/G | 0.8576 | likely_pathogenic | 0.8846 | pathogenic | -1.886 | Destabilizing | 0.999 | D | 0.565 | neutral | D | 0.558263344 | None | None | N |
R/H | 0.2798 | likely_benign | 0.3351 | benign | -1.775 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | N |
R/I | 0.8272 | likely_pathogenic | 0.8692 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
R/K | 0.37 | ambiguous | 0.4137 | ambiguous | -1.081 | Destabilizing | 0.946 | D | 0.617 | neutral | N | 0.506922639 | None | None | N |
R/L | 0.7358 | likely_pathogenic | 0.8051 | pathogenic | -0.551 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
R/M | 0.7905 | likely_pathogenic | 0.8515 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.629 | neutral | D | 0.526422927 | None | None | N |
R/N | 0.9552 | likely_pathogenic | 0.9687 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.536 | neutral | None | None | None | None | N |
R/P | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
R/Q | 0.1987 | likely_benign | 0.2302 | benign | -0.911 | Destabilizing | 0.984 | D | 0.453 | neutral | None | None | None | None | N |
R/S | 0.8898 | likely_pathogenic | 0.9187 | pathogenic | -1.873 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.51875947 | None | None | N |
R/T | 0.8195 | likely_pathogenic | 0.8768 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.559 | neutral | N | 0.498124001 | None | None | N |
R/V | 0.8367 | likely_pathogenic | 0.8793 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/W | 0.6127 | likely_pathogenic | 0.6894 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | D | 0.558516834 | None | None | N |
R/Y | 0.8552 | likely_pathogenic | 0.8992 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.