Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27942 | 84049;84050;84051 | chr2:178562308;178562307;178562306 | chr2:179427035;179427034;179427033 |
N2AB | 26301 | 79126;79127;79128 | chr2:178562308;178562307;178562306 | chr2:179427035;179427034;179427033 |
N2A | 25374 | 76345;76346;76347 | chr2:178562308;178562307;178562306 | chr2:179427035;179427034;179427033 |
N2B | 18877 | 56854;56855;56856 | chr2:178562308;178562307;178562306 | chr2:179427035;179427034;179427033 |
Novex-1 | 19002 | 57229;57230;57231 | chr2:178562308;178562307;178562306 | chr2:179427035;179427034;179427033 |
Novex-2 | 19069 | 57430;57431;57432 | chr2:178562308;178562307;178562306 | chr2:179427035;179427034;179427033 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1703962301 | None | 0.92 | N | 0.658 | 0.445 | 0.422160833541 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs1703962301 | None | 0.92 | N | 0.658 | 0.445 | 0.422160833541 | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46981E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5156 | ambiguous | 0.59 | pathogenic | 0.066 | Stabilizing | 0.781 | D | 0.587 | neutral | None | None | None | None | I |
K/C | 0.6928 | likely_pathogenic | 0.7838 | pathogenic | -0.191 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | I |
K/D | 0.9202 | likely_pathogenic | 0.9413 | pathogenic | -0.085 | Destabilizing | 0.962 | D | 0.659 | neutral | None | None | None | None | I |
K/E | 0.5339 | ambiguous | 0.6331 | pathogenic | -0.089 | Destabilizing | 0.766 | D | 0.601 | neutral | N | 0.506763085 | None | None | I |
K/F | 0.8468 | likely_pathogenic | 0.9065 | pathogenic | -0.188 | Destabilizing | 0.996 | D | 0.743 | deleterious | None | None | None | None | I |
K/G | 0.7295 | likely_pathogenic | 0.7782 | pathogenic | -0.106 | Destabilizing | 0.022 | N | 0.466 | neutral | None | None | None | None | I |
K/H | 0.4393 | ambiguous | 0.5363 | ambiguous | -0.298 | Destabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/I | 0.4896 | ambiguous | 0.5997 | pathogenic | 0.438 | Stabilizing | 0.82 | D | 0.748 | deleterious | None | None | None | None | I |
K/L | 0.5979 | likely_pathogenic | 0.6843 | pathogenic | 0.438 | Stabilizing | 0.599 | D | 0.659 | neutral | None | None | None | None | I |
K/M | 0.3209 | likely_benign | 0.4064 | ambiguous | 0.163 | Stabilizing | 0.981 | D | 0.687 | prob.neutral | N | 0.473067532 | None | None | I |
K/N | 0.6745 | likely_pathogenic | 0.7379 | pathogenic | 0.274 | Stabilizing | 0.95 | D | 0.672 | neutral | D | 0.523887408 | None | None | I |
K/P | 0.9817 | likely_pathogenic | 0.9847 | pathogenic | 0.341 | Stabilizing | 0.994 | D | 0.684 | prob.neutral | None | None | None | None | I |
K/Q | 0.2622 | likely_benign | 0.3359 | benign | 0.094 | Stabilizing | 0.934 | D | 0.683 | prob.neutral | N | 0.520116385 | None | None | I |
K/R | 0.1075 | likely_benign | 0.1215 | benign | 0.04 | Stabilizing | 0.669 | D | 0.568 | neutral | N | 0.471800085 | None | None | I |
K/S | 0.7034 | likely_pathogenic | 0.7602 | pathogenic | -0.156 | Destabilizing | 0.877 | D | 0.628 | neutral | None | None | None | None | I |
K/T | 0.4077 | ambiguous | 0.4672 | ambiguous | -0.026 | Destabilizing | 0.92 | D | 0.658 | neutral | N | 0.472053574 | None | None | I |
K/V | 0.4409 | ambiguous | 0.523 | ambiguous | 0.341 | Stabilizing | 0.663 | D | 0.709 | prob.delet. | None | None | None | None | I |
K/W | 0.8773 | likely_pathogenic | 0.9226 | pathogenic | -0.238 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
K/Y | 0.7172 | likely_pathogenic | 0.798 | pathogenic | 0.118 | Stabilizing | 0.878 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.