Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27945 | 84058;84059;84060 | chr2:178562299;178562298;178562297 | chr2:179427026;179427025;179427024 |
N2AB | 26304 | 79135;79136;79137 | chr2:178562299;178562298;178562297 | chr2:179427026;179427025;179427024 |
N2A | 25377 | 76354;76355;76356 | chr2:178562299;178562298;178562297 | chr2:179427026;179427025;179427024 |
N2B | 18880 | 56863;56864;56865 | chr2:178562299;178562298;178562297 | chr2:179427026;179427025;179427024 |
Novex-1 | 19005 | 57238;57239;57240 | chr2:178562299;178562298;178562297 | chr2:179427026;179427025;179427024 |
Novex-2 | 19072 | 57439;57440;57441 | chr2:178562299;178562298;178562297 | chr2:179427026;179427025;179427024 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 1.0 | D | 0.781 | 0.505 | 0.455173453901 | gnomAD-4.0.0 | 2.73762E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59824E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.5097 | ambiguous | 0.5678 | pathogenic | -0.653 | Destabilizing | 0.125 | N | 0.697 | prob.neutral | None | None | None | None | N |
S/C | 0.7707 | likely_pathogenic | 0.7955 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.549941551 | None | None | N |
S/D | 0.987 | likely_pathogenic | 0.99 | pathogenic | -1.448 | Destabilizing | 0.785 | D | 0.744 | deleterious | None | None | None | None | N |
S/E | 0.9944 | likely_pathogenic | 0.995 | pathogenic | -1.369 | Destabilizing | 0.912 | D | 0.759 | deleterious | None | None | None | None | N |
S/F | 0.9942 | likely_pathogenic | 0.9952 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
S/G | 0.153 | likely_benign | 0.2022 | benign | -0.973 | Destabilizing | 0.007 | N | 0.452 | neutral | N | 0.499671249 | None | None | N |
S/H | 0.9904 | likely_pathogenic | 0.9908 | pathogenic | -1.45 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
S/I | 0.9911 | likely_pathogenic | 0.993 | pathogenic | 0.115 | Stabilizing | 0.999 | D | 0.821 | deleterious | D | 0.549688061 | None | None | N |
S/K | 0.9983 | likely_pathogenic | 0.9985 | pathogenic | -0.962 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
S/L | 0.9569 | likely_pathogenic | 0.9647 | pathogenic | 0.115 | Stabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
S/M | 0.9722 | likely_pathogenic | 0.9786 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
S/N | 0.9553 | likely_pathogenic | 0.9618 | pathogenic | -1.255 | Destabilizing | 0.244 | N | 0.737 | prob.delet. | D | 0.548927593 | None | None | N |
S/P | 0.9946 | likely_pathogenic | 0.9952 | pathogenic | -0.106 | Destabilizing | 0.963 | D | 0.782 | deleterious | None | None | None | None | N |
S/Q | 0.9926 | likely_pathogenic | 0.9934 | pathogenic | -1.258 | Destabilizing | 0.99 | D | 0.778 | deleterious | None | None | None | None | N |
S/R | 0.997 | likely_pathogenic | 0.9972 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.531076827 | None | None | N |
S/T | 0.745 | likely_pathogenic | 0.8123 | pathogenic | -1.014 | Destabilizing | 0.05 | N | 0.714 | prob.delet. | D | 0.536557329 | None | None | N |
S/V | 0.9855 | likely_pathogenic | 0.9892 | pathogenic | -0.106 | Destabilizing | 0.997 | D | 0.816 | deleterious | None | None | None | None | N |
S/W | 0.9934 | likely_pathogenic | 0.9933 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
S/Y | 0.9885 | likely_pathogenic | 0.9897 | pathogenic | -0.347 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.