Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27948 | 84067;84068;84069 | chr2:178562290;178562289;178562288 | chr2:179427017;179427016;179427015 |
N2AB | 26307 | 79144;79145;79146 | chr2:178562290;178562289;178562288 | chr2:179427017;179427016;179427015 |
N2A | 25380 | 76363;76364;76365 | chr2:178562290;178562289;178562288 | chr2:179427017;179427016;179427015 |
N2B | 18883 | 56872;56873;56874 | chr2:178562290;178562289;178562288 | chr2:179427017;179427016;179427015 |
Novex-1 | 19008 | 57247;57248;57249 | chr2:178562290;178562289;178562288 | chr2:179427017;179427016;179427015 |
Novex-2 | 19075 | 57448;57449;57450 | chr2:178562290;178562289;178562288 | chr2:179427017;179427016;179427015 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.904 | N | 0.491 | 0.155 | 0.394079506076 | gnomAD-4.0.0 | 1.59229E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6493 | likely_pathogenic | 0.7775 | pathogenic | -0.917 | Destabilizing | 0.721 | D | 0.454 | neutral | None | None | None | None | I |
R/C | 0.2353 | likely_benign | 0.3266 | benign | -0.859 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
R/D | 0.956 | likely_pathogenic | 0.9777 | pathogenic | -0.035 | Destabilizing | 0.926 | D | 0.587 | neutral | None | None | None | None | I |
R/E | 0.7416 | likely_pathogenic | 0.8405 | pathogenic | 0.13 | Stabilizing | 0.437 | N | 0.417 | neutral | None | None | None | None | I |
R/F | 0.8025 | likely_pathogenic | 0.8942 | pathogenic | -0.44 | Destabilizing | 0.946 | D | 0.615 | neutral | None | None | None | None | I |
R/G | 0.6096 | likely_pathogenic | 0.7335 | pathogenic | -1.278 | Destabilizing | 0.904 | D | 0.559 | neutral | N | 0.485171518 | None | None | I |
R/H | 0.2419 | likely_benign | 0.3355 | benign | -1.466 | Destabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | I |
R/I | 0.4969 | ambiguous | 0.678 | pathogenic | 0.075 | Stabilizing | 0.662 | D | 0.556 | neutral | N | 0.462171164 | None | None | I |
R/K | 0.1712 | likely_benign | 0.2343 | benign | -0.897 | Destabilizing | None | N | 0.242 | neutral | N | 0.475917316 | None | None | I |
R/L | 0.5044 | ambiguous | 0.661 | pathogenic | 0.075 | Stabilizing | 0.517 | D | 0.501 | neutral | None | None | None | None | I |
R/M | 0.5426 | ambiguous | 0.7038 | pathogenic | -0.385 | Destabilizing | 0.974 | D | 0.611 | neutral | None | None | None | None | I |
R/N | 0.8868 | likely_pathogenic | 0.9409 | pathogenic | -0.45 | Destabilizing | 0.926 | D | 0.42 | neutral | None | None | None | None | I |
R/P | 0.9721 | likely_pathogenic | 0.9835 | pathogenic | -0.235 | Destabilizing | 0.989 | D | 0.627 | neutral | None | None | None | None | I |
R/Q | 0.1601 | likely_benign | 0.2127 | benign | -0.489 | Destabilizing | 0.902 | D | 0.416 | neutral | None | None | None | None | I |
R/S | 0.7557 | likely_pathogenic | 0.8514 | pathogenic | -1.25 | Destabilizing | 0.904 | D | 0.48 | neutral | N | 0.392844855 | None | None | I |
R/T | 0.5423 | ambiguous | 0.6971 | pathogenic | -0.882 | Destabilizing | 0.904 | D | 0.491 | neutral | N | 0.497887312 | None | None | I |
R/V | 0.5083 | ambiguous | 0.6778 | pathogenic | -0.235 | Destabilizing | 0.012 | N | 0.459 | neutral | None | None | None | None | I |
R/W | 0.4744 | ambiguous | 0.6098 | pathogenic | -0.025 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
R/Y | 0.6859 | likely_pathogenic | 0.7977 | pathogenic | 0.211 | Stabilizing | 0.973 | D | 0.625 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.