Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27955 | 84088;84089;84090 | chr2:178562269;178562268;178562267 | chr2:179426996;179426995;179426994 |
N2AB | 26314 | 79165;79166;79167 | chr2:178562269;178562268;178562267 | chr2:179426996;179426995;179426994 |
N2A | 25387 | 76384;76385;76386 | chr2:178562269;178562268;178562267 | chr2:179426996;179426995;179426994 |
N2B | 18890 | 56893;56894;56895 | chr2:178562269;178562268;178562267 | chr2:179426996;179426995;179426994 |
Novex-1 | 19015 | 57268;57269;57270 | chr2:178562269;178562268;178562267 | chr2:179426996;179426995;179426994 |
Novex-2 | 19082 | 57469;57470;57471 | chr2:178562269;178562268;178562267 | chr2:179426996;179426995;179426994 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.877 | N | 0.533 | 0.309 | 0.732347765206 | gnomAD-4.0.0 | 1.59219E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43398E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2449 | likely_benign | 0.2427 | benign | -1.297 | Destabilizing | 0.083 | N | 0.416 | neutral | None | None | None | None | I |
I/C | 0.7292 | likely_pathogenic | 0.7322 | pathogenic | -0.855 | Destabilizing | 0.922 | D | 0.384 | neutral | None | None | None | None | I |
I/D | 0.8005 | likely_pathogenic | 0.8281 | pathogenic | -0.602 | Destabilizing | 0.757 | D | 0.581 | neutral | None | None | None | None | I |
I/E | 0.5866 | likely_pathogenic | 0.6247 | pathogenic | -0.613 | Destabilizing | 0.697 | D | 0.523 | neutral | None | None | None | None | I |
I/F | 0.1807 | likely_benign | 0.2072 | benign | -0.826 | Destabilizing | 0.316 | N | 0.384 | neutral | N | 0.519471384 | None | None | I |
I/G | 0.705 | likely_pathogenic | 0.717 | pathogenic | -1.587 | Destabilizing | 0.757 | D | 0.494 | neutral | None | None | None | None | I |
I/H | 0.5452 | ambiguous | 0.5689 | pathogenic | -0.704 | Destabilizing | 0.937 | D | 0.551 | neutral | None | None | None | None | I |
I/K | 0.3799 | ambiguous | 0.4161 | ambiguous | -0.887 | Destabilizing | 0.084 | N | 0.529 | neutral | None | None | None | None | I |
I/L | 0.1249 | likely_benign | 0.1197 | benign | -0.593 | Destabilizing | None | N | 0.109 | neutral | N | 0.472810801 | None | None | I |
I/M | 0.0998 | likely_benign | 0.1027 | benign | -0.547 | Destabilizing | 0.122 | N | 0.478 | neutral | D | 0.530245738 | None | None | I |
I/N | 0.3661 | ambiguous | 0.3885 | ambiguous | -0.743 | Destabilizing | 0.877 | D | 0.533 | neutral | N | 0.481409915 | None | None | I |
I/P | 0.7762 | likely_pathogenic | 0.7823 | pathogenic | -0.795 | Destabilizing | 0.905 | D | 0.583 | neutral | None | None | None | None | I |
I/Q | 0.412 | ambiguous | 0.4322 | ambiguous | -0.907 | Destabilizing | 0.797 | D | 0.521 | neutral | None | None | None | None | I |
I/R | 0.2917 | likely_benign | 0.3289 | benign | -0.296 | Destabilizing | 0.554 | D | 0.541 | neutral | None | None | None | None | I |
I/S | 0.2826 | likely_benign | 0.2893 | benign | -1.334 | Destabilizing | 0.537 | D | 0.457 | neutral | N | 0.486636927 | None | None | I |
I/T | 0.0999 | likely_benign | 0.0998 | benign | -1.229 | Destabilizing | 0.09 | N | 0.385 | neutral | N | 0.432081686 | None | None | I |
I/V | 0.068 | likely_benign | 0.062 | benign | -0.795 | Destabilizing | None | N | 0.074 | neutral | N | 0.418034954 | None | None | I |
I/W | 0.8012 | likely_pathogenic | 0.8392 | pathogenic | -0.87 | Destabilizing | 0.982 | D | 0.637 | neutral | None | None | None | None | I |
I/Y | 0.5627 | ambiguous | 0.591 | pathogenic | -0.652 | Destabilizing | 0.127 | N | 0.457 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.