Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27972 | 84139;84140;84141 | chr2:178562218;178562217;178562216 | chr2:179426945;179426944;179426943 |
N2AB | 26331 | 79216;79217;79218 | chr2:178562218;178562217;178562216 | chr2:179426945;179426944;179426943 |
N2A | 25404 | 76435;76436;76437 | chr2:178562218;178562217;178562216 | chr2:179426945;179426944;179426943 |
N2B | 18907 | 56944;56945;56946 | chr2:178562218;178562217;178562216 | chr2:179426945;179426944;179426943 |
Novex-1 | 19032 | 57319;57320;57321 | chr2:178562218;178562217;178562216 | chr2:179426945;179426944;179426943 |
Novex-2 | 19099 | 57520;57521;57522 | chr2:178562218;178562217;178562216 | chr2:179426945;179426944;179426943 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1703936527 | None | 0.815 | N | 0.381 | 0.313 | 0.61599129918 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8385 | likely_pathogenic | 0.8747 | pathogenic | -2.312 | Highly Destabilizing | 0.59 | D | 0.381 | neutral | None | None | None | None | N |
F/C | 0.4468 | ambiguous | 0.4911 | ambiguous | -1.585 | Destabilizing | 0.994 | D | 0.397 | neutral | N | 0.483326153 | None | None | N |
F/D | 0.9784 | likely_pathogenic | 0.9866 | pathogenic | -1.335 | Destabilizing | 0.984 | D | 0.446 | neutral | None | None | None | None | N |
F/E | 0.965 | likely_pathogenic | 0.9761 | pathogenic | -1.18 | Destabilizing | 0.953 | D | 0.426 | neutral | None | None | None | None | N |
F/G | 0.9528 | likely_pathogenic | 0.9668 | pathogenic | -2.706 | Highly Destabilizing | 0.854 | D | 0.408 | neutral | None | None | None | None | N |
F/H | 0.7874 | likely_pathogenic | 0.8225 | pathogenic | -0.972 | Destabilizing | 0.91 | D | 0.336 | neutral | None | None | None | None | N |
F/I | 0.2901 | likely_benign | 0.3073 | benign | -1.09 | Destabilizing | 0.521 | D | 0.33 | neutral | N | 0.451304952 | None | None | N |
F/K | 0.9496 | likely_pathogenic | 0.9633 | pathogenic | -1.686 | Destabilizing | 0.953 | D | 0.424 | neutral | None | None | None | None | N |
F/L | 0.928 | likely_pathogenic | 0.9298 | pathogenic | -1.09 | Destabilizing | 0.309 | N | 0.307 | neutral | N | 0.470352073 | None | None | N |
F/M | 0.6643 | likely_pathogenic | 0.6925 | pathogenic | -0.914 | Destabilizing | 0.953 | D | 0.327 | neutral | None | None | None | None | N |
F/N | 0.9283 | likely_pathogenic | 0.9486 | pathogenic | -1.943 | Destabilizing | 0.953 | D | 0.46 | neutral | None | None | None | None | N |
F/P | 0.9976 | likely_pathogenic | 0.9983 | pathogenic | -1.497 | Destabilizing | 0.984 | D | 0.453 | neutral | None | None | None | None | N |
F/Q | 0.9163 | likely_pathogenic | 0.9374 | pathogenic | -1.881 | Destabilizing | 0.953 | D | 0.454 | neutral | None | None | None | None | N |
F/R | 0.8913 | likely_pathogenic | 0.9183 | pathogenic | -1.171 | Destabilizing | 0.953 | D | 0.456 | neutral | None | None | None | None | N |
F/S | 0.8152 | likely_pathogenic | 0.8656 | pathogenic | -2.758 | Highly Destabilizing | 0.815 | D | 0.381 | neutral | N | 0.482312195 | None | None | N |
F/T | 0.8236 | likely_pathogenic | 0.8612 | pathogenic | -2.493 | Highly Destabilizing | 0.742 | D | 0.366 | neutral | None | None | None | None | N |
F/V | 0.2711 | likely_benign | 0.2936 | benign | -1.497 | Destabilizing | 0.007 | N | 0.187 | neutral | N | 0.435543279 | None | None | N |
F/W | 0.5429 | ambiguous | 0.6019 | pathogenic | -0.178 | Destabilizing | 0.953 | D | 0.346 | neutral | None | None | None | None | N |
F/Y | 0.1541 | likely_benign | 0.1669 | benign | -0.511 | Destabilizing | 0.001 | N | 0.124 | neutral | N | 0.403631222 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.