Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27980 | 84163;84164;84165 | chr2:178562194;178562193;178562192 | chr2:179426921;179426920;179426919 |
N2AB | 26339 | 79240;79241;79242 | chr2:178562194;178562193;178562192 | chr2:179426921;179426920;179426919 |
N2A | 25412 | 76459;76460;76461 | chr2:178562194;178562193;178562192 | chr2:179426921;179426920;179426919 |
N2B | 18915 | 56968;56969;56970 | chr2:178562194;178562193;178562192 | chr2:179426921;179426920;179426919 |
Novex-1 | 19040 | 57343;57344;57345 | chr2:178562194;178562193;178562192 | chr2:179426921;179426920;179426919 |
Novex-2 | 19107 | 57544;57545;57546 | chr2:178562194;178562193;178562192 | chr2:179426921;179426920;179426919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1060500536 | None | 0.142 | N | 0.535 | 0.418 | 0.728030011221 | gnomAD-4.0.0 | 4.10741E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7489 | likely_pathogenic | 0.7799 | pathogenic | -2.047 | Highly Destabilizing | 0.938 | D | 0.632 | neutral | None | None | None | None | N |
L/C | 0.7494 | likely_pathogenic | 0.7903 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/D | 0.9928 | likely_pathogenic | 0.9965 | pathogenic | -1.425 | Destabilizing | 0.991 | D | 0.833 | deleterious | None | None | None | None | N |
L/E | 0.9612 | likely_pathogenic | 0.9801 | pathogenic | -1.264 | Destabilizing | 0.991 | D | 0.824 | deleterious | None | None | None | None | N |
L/F | 0.3907 | ambiguous | 0.4271 | ambiguous | -1.103 | Destabilizing | 0.998 | D | 0.771 | deleterious | N | 0.454859648 | None | None | N |
L/G | 0.9389 | likely_pathogenic | 0.9553 | pathogenic | -2.538 | Highly Destabilizing | 0.991 | D | 0.823 | deleterious | None | None | None | None | N |
L/H | 0.9106 | likely_pathogenic | 0.952 | pathogenic | -1.74 | Destabilizing | 0.999 | D | 0.833 | deleterious | N | 0.501881485 | None | None | N |
L/I | 0.1388 | likely_benign | 0.1264 | benign | -0.684 | Destabilizing | 0.979 | D | 0.581 | neutral | N | 0.488416893 | None | None | N |
L/K | 0.9295 | likely_pathogenic | 0.9642 | pathogenic | -1.491 | Destabilizing | 0.991 | D | 0.8 | deleterious | None | None | None | None | N |
L/M | 0.2115 | likely_benign | 0.2224 | benign | -0.734 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
L/N | 0.9658 | likely_pathogenic | 0.9807 | pathogenic | -1.616 | Destabilizing | 0.995 | D | 0.849 | deleterious | None | None | None | None | N |
L/P | 0.9719 | likely_pathogenic | 0.9814 | pathogenic | -1.112 | Destabilizing | 0.142 | N | 0.535 | neutral | N | 0.501881485 | None | None | N |
L/Q | 0.8385 | likely_pathogenic | 0.9132 | pathogenic | -1.544 | Destabilizing | 0.995 | D | 0.833 | deleterious | None | None | None | None | N |
L/R | 0.8861 | likely_pathogenic | 0.9407 | pathogenic | -1.157 | Destabilizing | 0.994 | D | 0.821 | deleterious | N | 0.490107106 | None | None | N |
L/S | 0.9438 | likely_pathogenic | 0.9639 | pathogenic | -2.419 | Highly Destabilizing | 0.991 | D | 0.787 | deleterious | None | None | None | None | N |
L/T | 0.7922 | likely_pathogenic | 0.8383 | pathogenic | -2.105 | Highly Destabilizing | 0.991 | D | 0.775 | deleterious | None | None | None | None | N |
L/V | 0.1444 | likely_benign | 0.1412 | benign | -1.112 | Destabilizing | 0.958 | D | 0.534 | neutral | N | 0.47481009 | None | None | N |
L/W | 0.7888 | likely_pathogenic | 0.853 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/Y | 0.8444 | likely_pathogenic | 0.8932 | pathogenic | -1.029 | Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.