Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27981 | 84166;84167;84168 | chr2:178562191;178562190;178562189 | chr2:179426918;179426917;179426916 |
N2AB | 26340 | 79243;79244;79245 | chr2:178562191;178562190;178562189 | chr2:179426918;179426917;179426916 |
N2A | 25413 | 76462;76463;76464 | chr2:178562191;178562190;178562189 | chr2:179426918;179426917;179426916 |
N2B | 18916 | 56971;56972;56973 | chr2:178562191;178562190;178562189 | chr2:179426918;179426917;179426916 |
Novex-1 | 19041 | 57346;57347;57348 | chr2:178562191;178562190;178562189 | chr2:179426918;179426917;179426916 |
Novex-2 | 19108 | 57547;57548;57549 | chr2:178562191;178562190;178562189 | chr2:179426918;179426917;179426916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1472389863 | 0.403 | 0.82 | N | 0.593 | 0.182 | 0.176091768786 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs1472389863 | 0.403 | 0.82 | N | 0.593 | 0.182 | 0.176091768786 | gnomAD-4.0.0 | 1.59331E-06 | None | None | None | None | N | None | 0 | 2.29211E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4075 | ambiguous | 0.4486 | ambiguous | -0.3 | Destabilizing | 0.633 | D | 0.577 | neutral | None | None | None | None | N |
K/C | 0.5889 | likely_pathogenic | 0.6059 | pathogenic | -0.408 | Destabilizing | 0.996 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/D | 0.6922 | likely_pathogenic | 0.7091 | pathogenic | 0.235 | Stabilizing | 0.633 | D | 0.589 | neutral | None | None | None | None | N |
K/E | 0.2725 | likely_benign | 0.3032 | benign | 0.28 | Stabilizing | 0.008 | N | 0.383 | neutral | N | 0.509386811 | None | None | N |
K/F | 0.7457 | likely_pathogenic | 0.766 | pathogenic | -0.368 | Destabilizing | 0.923 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/G | 0.6236 | likely_pathogenic | 0.6574 | pathogenic | -0.57 | Destabilizing | 0.923 | D | 0.585 | neutral | None | None | None | None | N |
K/H | 0.2334 | likely_benign | 0.2262 | benign | -0.961 | Destabilizing | 0.989 | D | 0.659 | neutral | None | None | None | None | N |
K/I | 0.2926 | likely_benign | 0.3208 | benign | 0.35 | Stabilizing | 0.858 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/L | 0.3546 | ambiguous | 0.3969 | ambiguous | 0.35 | Stabilizing | 0.372 | N | 0.561 | neutral | None | None | None | None | N |
K/M | 0.2063 | likely_benign | 0.24 | benign | 0.285 | Stabilizing | 0.156 | N | 0.492 | neutral | N | 0.493635371 | None | None | N |
K/N | 0.4409 | ambiguous | 0.4753 | ambiguous | 0.029 | Stabilizing | 0.901 | D | 0.602 | neutral | N | 0.470388492 | None | None | N |
K/P | 0.9046 | likely_pathogenic | 0.9339 | pathogenic | 0.164 | Stabilizing | 0.961 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/Q | 0.128 | likely_benign | 0.1349 | benign | -0.158 | Destabilizing | 0.82 | D | 0.593 | neutral | N | 0.510253603 | None | None | N |
K/R | 0.082 | likely_benign | 0.0819 | benign | -0.218 | Destabilizing | 0.722 | D | 0.544 | neutral | N | 0.485509874 | None | None | N |
K/S | 0.4316 | ambiguous | 0.465 | ambiguous | -0.631 | Destabilizing | 0.775 | D | 0.554 | neutral | None | None | None | None | N |
K/T | 0.1441 | likely_benign | 0.1629 | benign | -0.405 | Destabilizing | 0.901 | D | 0.625 | neutral | N | 0.468537479 | None | None | N |
K/V | 0.2699 | likely_benign | 0.2946 | benign | 0.164 | Stabilizing | 0.633 | D | 0.57 | neutral | None | None | None | None | N |
K/W | 0.7361 | likely_pathogenic | 0.7401 | pathogenic | -0.259 | Destabilizing | 0.996 | D | 0.669 | neutral | None | None | None | None | N |
K/Y | 0.6008 | likely_pathogenic | 0.6153 | pathogenic | 0.079 | Stabilizing | 0.961 | D | 0.69 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.