Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27982 | 84169;84170;84171 | chr2:178562188;178562187;178562186 | chr2:179426915;179426914;179426913 |
N2AB | 26341 | 79246;79247;79248 | chr2:178562188;178562187;178562186 | chr2:179426915;179426914;179426913 |
N2A | 25414 | 76465;76466;76467 | chr2:178562188;178562187;178562186 | chr2:179426915;179426914;179426913 |
N2B | 18917 | 56974;56975;56976 | chr2:178562188;178562187;178562186 | chr2:179426915;179426914;179426913 |
Novex-1 | 19042 | 57349;57350;57351 | chr2:178562188;178562187;178562186 | chr2:179426915;179426914;179426913 |
Novex-2 | 19109 | 57550;57551;57552 | chr2:178562188;178562187;178562186 | chr2:179426915;179426914;179426913 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs773976497 | None | 0.722 | N | 0.753 | 0.556 | 0.59698544216 | gnomAD-4.0.0 | 2.73825E-06 | None | None | None | None | N | None | 0 | 2.24155E-05 | None | 0 | 0 | None | 0 | 1.73551E-04 | 0 | 0 | 3.31543E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6331 | likely_pathogenic | 0.6469 | pathogenic | -2.054 | Highly Destabilizing | 0.011 | N | 0.516 | neutral | None | None | None | None | N |
I/C | 0.9204 | likely_pathogenic | 0.9178 | pathogenic | -1.635 | Destabilizing | 0.989 | D | 0.745 | deleterious | None | None | None | None | N |
I/D | 0.9919 | likely_pathogenic | 0.9943 | pathogenic | -1.547 | Destabilizing | 0.961 | D | 0.857 | deleterious | None | None | None | None | N |
I/E | 0.9773 | likely_pathogenic | 0.9836 | pathogenic | -1.312 | Destabilizing | 0.923 | D | 0.841 | deleterious | None | None | None | None | N |
I/F | 0.4101 | ambiguous | 0.3992 | ambiguous | -1.234 | Destabilizing | 0.901 | D | 0.711 | prob.delet. | N | 0.512363693 | None | None | N |
I/G | 0.9543 | likely_pathogenic | 0.9594 | pathogenic | -2.555 | Highly Destabilizing | 0.858 | D | 0.823 | deleterious | None | None | None | None | N |
I/H | 0.9805 | likely_pathogenic | 0.9857 | pathogenic | -1.834 | Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | N |
I/K | 0.9592 | likely_pathogenic | 0.9706 | pathogenic | -1.409 | Destabilizing | 0.923 | D | 0.843 | deleterious | None | None | None | None | N |
I/L | 0.2065 | likely_benign | 0.1827 | benign | -0.611 | Destabilizing | 0.19 | N | 0.51 | neutral | N | 0.450005725 | None | None | N |
I/M | 0.1699 | likely_benign | 0.1704 | benign | -0.8 | Destabilizing | 0.901 | D | 0.671 | neutral | N | 0.488263677 | None | None | N |
I/N | 0.933 | likely_pathogenic | 0.9542 | pathogenic | -1.778 | Destabilizing | 0.949 | D | 0.852 | deleterious | D | 0.529120223 | None | None | N |
I/P | 0.9816 | likely_pathogenic | 0.9848 | pathogenic | -1.074 | Destabilizing | 0.961 | D | 0.857 | deleterious | None | None | None | None | N |
I/Q | 0.9678 | likely_pathogenic | 0.9747 | pathogenic | -1.532 | Destabilizing | 0.961 | D | 0.848 | deleterious | None | None | None | None | N |
I/R | 0.9359 | likely_pathogenic | 0.9542 | pathogenic | -1.381 | Destabilizing | 0.961 | D | 0.852 | deleterious | None | None | None | None | N |
I/S | 0.8859 | likely_pathogenic | 0.9105 | pathogenic | -2.548 | Highly Destabilizing | 0.565 | D | 0.82 | deleterious | D | 0.529120223 | None | None | N |
I/T | 0.6476 | likely_pathogenic | 0.6916 | pathogenic | -2.141 | Highly Destabilizing | 0.722 | D | 0.753 | deleterious | N | 0.510927063 | None | None | N |
I/V | 0.1002 | likely_benign | 0.101 | benign | -1.074 | Destabilizing | 0.003 | N | 0.274 | neutral | D | 0.524746705 | None | None | N |
I/W | 0.9665 | likely_pathogenic | 0.9645 | pathogenic | -1.37 | Destabilizing | 0.996 | D | 0.816 | deleterious | None | None | None | None | N |
I/Y | 0.8894 | likely_pathogenic | 0.8949 | pathogenic | -1.126 | Destabilizing | 0.961 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.