Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27986 | 84181;84182;84183 | chr2:178562176;178562175;178562174 | chr2:179426903;179426902;179426901 |
N2AB | 26345 | 79258;79259;79260 | chr2:178562176;178562175;178562174 | chr2:179426903;179426902;179426901 |
N2A | 25418 | 76477;76478;76479 | chr2:178562176;178562175;178562174 | chr2:179426903;179426902;179426901 |
N2B | 18921 | 56986;56987;56988 | chr2:178562176;178562175;178562174 | chr2:179426903;179426902;179426901 |
Novex-1 | 19046 | 57361;57362;57363 | chr2:178562176;178562175;178562174 | chr2:179426903;179426902;179426901 |
Novex-2 | 19113 | 57562;57563;57564 | chr2:178562176;178562175;178562174 | chr2:179426903;179426902;179426901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1184136352 | -1.774 | 0.027 | N | 0.603 | 0.195 | 0.257786959452 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8352 | likely_pathogenic | 0.8391 | pathogenic | -2.979 | Highly Destabilizing | 0.081 | N | 0.678 | prob.neutral | None | None | None | None | N |
F/C | 0.3776 | ambiguous | 0.3695 | ambiguous | -1.948 | Destabilizing | 0.915 | D | 0.743 | deleterious | N | 0.488263677 | None | None | N |
F/D | 0.9891 | likely_pathogenic | 0.99 | pathogenic | -2.876 | Highly Destabilizing | 0.38 | N | 0.805 | deleterious | None | None | None | None | N |
F/E | 0.9828 | likely_pathogenic | 0.9842 | pathogenic | -2.723 | Highly Destabilizing | 0.555 | D | 0.805 | deleterious | None | None | None | None | N |
F/G | 0.9505 | likely_pathogenic | 0.9521 | pathogenic | -3.376 | Highly Destabilizing | 0.001 | N | 0.491 | neutral | None | None | None | None | N |
F/H | 0.8502 | likely_pathogenic | 0.8393 | pathogenic | -1.703 | Destabilizing | 0.38 | N | 0.749 | deleterious | None | None | None | None | N |
F/I | 0.1911 | likely_benign | 0.1935 | benign | -1.704 | Destabilizing | 0.001 | N | 0.431 | neutral | N | 0.466578262 | None | None | N |
F/K | 0.9714 | likely_pathogenic | 0.9721 | pathogenic | -1.915 | Destabilizing | 0.38 | N | 0.805 | deleterious | None | None | None | None | N |
F/L | 0.8482 | likely_pathogenic | 0.8533 | pathogenic | -1.704 | Destabilizing | 0.027 | N | 0.603 | neutral | N | 0.488944786 | None | None | N |
F/M | 0.5818 | likely_pathogenic | 0.5984 | pathogenic | -1.53 | Destabilizing | 0.38 | N | 0.667 | neutral | None | None | None | None | N |
F/N | 0.9538 | likely_pathogenic | 0.9522 | pathogenic | -2.159 | Highly Destabilizing | 0.38 | N | 0.805 | deleterious | None | None | None | None | N |
F/P | 0.9943 | likely_pathogenic | 0.9945 | pathogenic | -2.135 | Highly Destabilizing | 0.791 | D | 0.804 | deleterious | None | None | None | None | N |
F/Q | 0.9467 | likely_pathogenic | 0.95 | pathogenic | -2.242 | Highly Destabilizing | 0.555 | D | 0.799 | deleterious | None | None | None | None | N |
F/R | 0.9359 | likely_pathogenic | 0.9395 | pathogenic | -1.243 | Destabilizing | 0.38 | N | 0.805 | deleterious | None | None | None | None | N |
F/S | 0.8276 | likely_pathogenic | 0.8267 | pathogenic | -2.88 | Highly Destabilizing | 0.117 | N | 0.754 | deleterious | D | 0.534366266 | None | None | N |
F/T | 0.8405 | likely_pathogenic | 0.8391 | pathogenic | -2.626 | Highly Destabilizing | 0.38 | N | 0.775 | deleterious | None | None | None | None | N |
F/V | 0.1963 | likely_benign | 0.2004 | benign | -2.135 | Highly Destabilizing | 0.062 | N | 0.66 | neutral | N | 0.427590226 | None | None | N |
F/W | 0.575 | likely_pathogenic | 0.5841 | pathogenic | -0.502 | Destabilizing | 0.824 | D | 0.655 | neutral | None | None | None | None | N |
F/Y | 0.1987 | likely_benign | 0.1989 | benign | -0.865 | Destabilizing | None | N | 0.305 | neutral | N | 0.508142457 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.