Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27988 | 84187;84188;84189 | chr2:178562170;178562169;178562168 | chr2:179426897;179426896;179426895 |
N2AB | 26347 | 79264;79265;79266 | chr2:178562170;178562169;178562168 | chr2:179426897;179426896;179426895 |
N2A | 25420 | 76483;76484;76485 | chr2:178562170;178562169;178562168 | chr2:179426897;179426896;179426895 |
N2B | 18923 | 56992;56993;56994 | chr2:178562170;178562169;178562168 | chr2:179426897;179426896;179426895 |
Novex-1 | 19048 | 57367;57368;57369 | chr2:178562170;178562169;178562168 | chr2:179426897;179426896;179426895 |
Novex-2 | 19115 | 57568;57569;57570 | chr2:178562170;178562169;178562168 | chr2:179426897;179426896;179426895 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs267599033 | None | 0.056 | D | 0.424 | 0.73 | 0.476127810785 | gnomAD-4.0.0 | 1.59299E-06 | None | None | None | None | I | None | 0 | 2.29232E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2446 | likely_benign | 0.2885 | benign | -0.459 | Destabilizing | 0.099 | N | 0.334 | neutral | D | 0.537230347 | None | None | I |
G/C | 0.653 | likely_pathogenic | 0.695 | pathogenic | -0.787 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
G/D | 0.975 | likely_pathogenic | 0.9844 | pathogenic | -0.843 | Destabilizing | 0.95 | D | 0.626 | neutral | None | None | None | None | I |
G/E | 0.9749 | likely_pathogenic | 0.9853 | pathogenic | -0.961 | Destabilizing | 0.056 | N | 0.424 | neutral | D | 0.630167647 | None | None | I |
G/F | 0.9776 | likely_pathogenic | 0.9805 | pathogenic | -0.951 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
G/H | 0.9894 | likely_pathogenic | 0.9926 | pathogenic | -1.014 | Destabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | I |
G/I | 0.908 | likely_pathogenic | 0.936 | pathogenic | -0.332 | Destabilizing | 0.987 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/K | 0.9945 | likely_pathogenic | 0.9966 | pathogenic | -1.171 | Destabilizing | 0.95 | D | 0.623 | neutral | None | None | None | None | I |
G/L | 0.9306 | likely_pathogenic | 0.9433 | pathogenic | -0.332 | Destabilizing | 0.975 | D | 0.694 | prob.neutral | None | None | None | None | I |
G/M | 0.9557 | likely_pathogenic | 0.9663 | pathogenic | -0.337 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | I |
G/N | 0.9718 | likely_pathogenic | 0.9793 | pathogenic | -0.724 | Destabilizing | 0.975 | D | 0.624 | neutral | None | None | None | None | I |
G/P | 0.9944 | likely_pathogenic | 0.9964 | pathogenic | -0.335 | Destabilizing | 0.073 | N | 0.427 | neutral | None | None | None | None | I |
G/Q | 0.98 | likely_pathogenic | 0.9869 | pathogenic | -0.961 | Destabilizing | 0.975 | D | 0.642 | neutral | None | None | None | None | I |
G/R | 0.9809 | likely_pathogenic | 0.9881 | pathogenic | -0.788 | Destabilizing | 0.967 | D | 0.635 | neutral | D | 0.633800123 | None | None | I |
G/S | 0.4275 | ambiguous | 0.5333 | ambiguous | -0.888 | Destabilizing | 0.845 | D | 0.567 | neutral | None | None | None | None | I |
G/T | 0.7997 | likely_pathogenic | 0.8536 | pathogenic | -0.937 | Destabilizing | 0.975 | D | 0.623 | neutral | None | None | None | None | I |
G/V | 0.7942 | likely_pathogenic | 0.8524 | pathogenic | -0.335 | Destabilizing | 0.967 | D | 0.697 | prob.neutral | D | 0.633800123 | None | None | I |
G/W | 0.9737 | likely_pathogenic | 0.9812 | pathogenic | -1.232 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | I |
G/Y | 0.972 | likely_pathogenic | 0.9782 | pathogenic | -0.856 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.