Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27995 | 84208;84209;84210 | chr2:178562149;178562148;178562147 | chr2:179426876;179426875;179426874 |
N2AB | 26354 | 79285;79286;79287 | chr2:178562149;178562148;178562147 | chr2:179426876;179426875;179426874 |
N2A | 25427 | 76504;76505;76506 | chr2:178562149;178562148;178562147 | chr2:179426876;179426875;179426874 |
N2B | 18930 | 57013;57014;57015 | chr2:178562149;178562148;178562147 | chr2:179426876;179426875;179426874 |
Novex-1 | 19055 | 57388;57389;57390 | chr2:178562149;178562148;178562147 | chr2:179426876;179426875;179426874 |
Novex-2 | 19122 | 57589;57590;57591 | chr2:178562149;178562148;178562147 | chr2:179426876;179426875;179426874 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs751728774 | -0.027 | None | N | 0.115 | 0.084 | 0.0482279557977 | gnomAD-2.1.1 | 8.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
N/T | rs751728774 | -0.027 | None | N | 0.115 | 0.084 | 0.0482279557977 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/T | rs751728774 | -0.027 | None | N | 0.115 | 0.084 | 0.0482279557977 | gnomAD-4.0.0 | 4.95929E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78203E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0914 | likely_benign | 0.0834 | benign | -0.783 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | N |
N/C | 0.112 | likely_benign | 0.1048 | benign | 0.128 | Stabilizing | 0.245 | N | 0.489 | neutral | None | None | None | None | N |
N/D | 0.1056 | likely_benign | 0.113 | benign | -0.404 | Destabilizing | 0.003 | N | 0.298 | neutral | N | 0.478358268 | None | None | N |
N/E | 0.1773 | likely_benign | 0.174 | benign | -0.339 | Destabilizing | 0.004 | N | 0.293 | neutral | None | None | None | None | N |
N/F | 0.1943 | likely_benign | 0.1698 | benign | -0.64 | Destabilizing | 0.044 | N | 0.523 | neutral | None | None | None | None | N |
N/G | 0.1664 | likely_benign | 0.1639 | benign | -1.099 | Destabilizing | 0.002 | N | 0.299 | neutral | None | None | None | None | N |
N/H | 0.0691 | likely_benign | 0.0691 | benign | -0.949 | Destabilizing | 0.196 | N | 0.41 | neutral | N | 0.423198418 | None | None | N |
N/I | 0.0724 | likely_benign | 0.0639 | benign | 0.008 | Stabilizing | None | N | 0.374 | neutral | N | 0.410269193 | None | None | N |
N/K | 0.1526 | likely_benign | 0.1512 | benign | -0.26 | Destabilizing | 0.003 | N | 0.289 | neutral | N | 0.402879074 | None | None | N |
N/L | 0.0877 | likely_benign | 0.0782 | benign | 0.008 | Stabilizing | 0.001 | N | 0.371 | neutral | None | None | None | None | N |
N/M | 0.1376 | likely_benign | 0.1209 | benign | 0.473 | Stabilizing | 0.138 | N | 0.519 | neutral | None | None | None | None | N |
N/P | 0.7634 | likely_pathogenic | 0.8059 | pathogenic | -0.226 | Destabilizing | 0.018 | N | 0.431 | neutral | None | None | None | None | N |
N/Q | 0.1514 | likely_benign | 0.1428 | benign | -0.784 | Destabilizing | 0.001 | N | 0.162 | neutral | None | None | None | None | N |
N/R | 0.1625 | likely_benign | 0.158 | benign | -0.286 | Destabilizing | 0.018 | N | 0.335 | neutral | None | None | None | None | N |
N/S | 0.0514 | likely_benign | 0.0494 | benign | -0.737 | Destabilizing | None | N | 0.114 | neutral | N | 0.322625992 | None | None | N |
N/T | 0.0486 | likely_benign | 0.0458 | benign | -0.487 | Destabilizing | None | N | 0.115 | neutral | N | 0.317241602 | None | None | N |
N/V | 0.0809 | likely_benign | 0.0722 | benign | -0.226 | Destabilizing | 0.001 | N | 0.373 | neutral | None | None | None | None | N |
N/W | 0.4593 | ambiguous | 0.4521 | ambiguous | -0.435 | Destabilizing | 0.788 | D | 0.484 | neutral | None | None | None | None | N |
N/Y | 0.0917 | likely_benign | 0.0908 | benign | -0.24 | Destabilizing | 0.065 | N | 0.503 | neutral | N | 0.449768944 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.