Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28002 | 84229;84230;84231 | chr2:178562128;178562127;178562126 | chr2:179426855;179426854;179426853 |
N2AB | 26361 | 79306;79307;79308 | chr2:178562128;178562127;178562126 | chr2:179426855;179426854;179426853 |
N2A | 25434 | 76525;76526;76527 | chr2:178562128;178562127;178562126 | chr2:179426855;179426854;179426853 |
N2B | 18937 | 57034;57035;57036 | chr2:178562128;178562127;178562126 | chr2:179426855;179426854;179426853 |
Novex-1 | 19062 | 57409;57410;57411 | chr2:178562128;178562127;178562126 | chr2:179426855;179426854;179426853 |
Novex-2 | 19129 | 57610;57611;57612 | chr2:178562128;178562127;178562126 | chr2:179426855;179426854;179426853 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs369737884 | None | None | N | 0.241 | 0.15 | None | gnomAD-4.0.0 | 1.59276E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86E-06 | 0 | 0 |
T/S | None | None | None | N | 0.141 | 0.107 | 0.0884992946249 | gnomAD-4.0.0 | 1.59276E-06 | None | None | None | None | N | None | 0 | 2.29074E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0599 | likely_benign | 0.0583 | benign | -0.458 | Destabilizing | None | N | 0.123 | neutral | N | 0.414885579 | None | None | N |
T/C | 0.2368 | likely_benign | 0.2194 | benign | -0.276 | Destabilizing | 0.245 | N | 0.321 | neutral | None | None | None | None | N |
T/D | 0.2108 | likely_benign | 0.178 | benign | 0.049 | Stabilizing | None | N | 0.235 | neutral | None | None | None | None | N |
T/E | 0.164 | likely_benign | 0.147 | benign | -0.017 | Destabilizing | 0.009 | N | 0.364 | neutral | None | None | None | None | N |
T/F | 0.125 | likely_benign | 0.1065 | benign | -0.806 | Destabilizing | 0.044 | N | 0.463 | neutral | None | None | None | None | N |
T/G | 0.1747 | likely_benign | 0.1503 | benign | -0.622 | Destabilizing | 0.009 | N | 0.3 | neutral | None | None | None | None | N |
T/H | 0.1513 | likely_benign | 0.1404 | benign | -0.907 | Destabilizing | 0.245 | N | 0.389 | neutral | None | None | None | None | N |
T/I | 0.0629 | likely_benign | 0.0554 | benign | -0.139 | Destabilizing | None | N | 0.165 | neutral | N | 0.498426896 | None | None | N |
T/K | 0.131 | likely_benign | 0.1207 | benign | -0.516 | Destabilizing | 0.009 | N | 0.362 | neutral | None | None | None | None | N |
T/L | 0.0526 | likely_benign | 0.0488 | benign | -0.139 | Destabilizing | None | N | 0.154 | neutral | None | None | None | None | N |
T/M | 0.0624 | likely_benign | 0.061 | benign | 0.086 | Stabilizing | 0.138 | N | 0.364 | neutral | None | None | None | None | N |
T/N | 0.0778 | likely_benign | 0.0686 | benign | -0.25 | Destabilizing | 0.017 | N | 0.231 | neutral | N | 0.483822802 | None | None | N |
T/P | 0.0515 | likely_benign | 0.0475 | benign | -0.215 | Destabilizing | None | N | 0.241 | neutral | N | 0.394086232 | None | None | N |
T/Q | 0.1379 | likely_benign | 0.1283 | benign | -0.501 | Destabilizing | 0.044 | N | 0.399 | neutral | None | None | None | None | N |
T/R | 0.1244 | likely_benign | 0.119 | benign | -0.206 | Destabilizing | 0.044 | N | 0.393 | neutral | None | None | None | None | N |
T/S | 0.0864 | likely_benign | 0.0816 | benign | -0.486 | Destabilizing | None | N | 0.141 | neutral | N | 0.440840029 | None | None | N |
T/V | 0.0621 | likely_benign | 0.0579 | benign | -0.215 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | N |
T/W | 0.388 | ambiguous | 0.3475 | ambiguous | -0.774 | Destabilizing | 0.788 | D | 0.389 | neutral | None | None | None | None | N |
T/Y | 0.1553 | likely_benign | 0.1386 | benign | -0.525 | Destabilizing | 0.245 | N | 0.46 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.