Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28003 | 84232;84233;84234 | chr2:178562125;178562124;178562123 | chr2:179426852;179426851;179426850 |
N2AB | 26362 | 79309;79310;79311 | chr2:178562125;178562124;178562123 | chr2:179426852;179426851;179426850 |
N2A | 25435 | 76528;76529;76530 | chr2:178562125;178562124;178562123 | chr2:179426852;179426851;179426850 |
N2B | 18938 | 57037;57038;57039 | chr2:178562125;178562124;178562123 | chr2:179426852;179426851;179426850 |
Novex-1 | 19063 | 57412;57413;57414 | chr2:178562125;178562124;178562123 | chr2:179426852;179426851;179426850 |
Novex-2 | 19130 | 57613;57614;57615 | chr2:178562125;178562124;178562123 | chr2:179426852;179426851;179426850 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.999 | D | 0.474 | 0.416 | 0.470237251169 | gnomAD-4.0.0 | 1.36896E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99649E-07 | 0 | 1.65733E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8602 | likely_pathogenic | 0.8582 | pathogenic | -2.062 | Highly Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
L/C | 0.8904 | likely_pathogenic | 0.8898 | pathogenic | -1.45 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/D | 0.9957 | likely_pathogenic | 0.9963 | pathogenic | -1.551 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/E | 0.9666 | likely_pathogenic | 0.9722 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/F | 0.483 | ambiguous | 0.4455 | ambiguous | -1.17 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | D | 0.525799903 | None | None | N |
L/G | 0.9734 | likely_pathogenic | 0.9748 | pathogenic | -2.543 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/H | 0.932 | likely_pathogenic | 0.9454 | pathogenic | -1.763 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.556274422 | None | None | N |
L/I | 0.1279 | likely_benign | 0.1149 | benign | -0.728 | Destabilizing | 0.999 | D | 0.477 | neutral | N | 0.486888233 | None | None | N |
L/K | 0.9342 | likely_pathogenic | 0.9498 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/M | 0.2736 | likely_benign | 0.2535 | benign | -0.707 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/N | 0.9782 | likely_pathogenic | 0.9813 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/P | 0.8944 | likely_pathogenic | 0.903 | pathogenic | -1.147 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.556020932 | None | None | N |
L/Q | 0.872 | likely_pathogenic | 0.8975 | pathogenic | -1.581 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/R | 0.8869 | likely_pathogenic | 0.9188 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.533308322 | None | None | N |
L/S | 0.958 | likely_pathogenic | 0.9607 | pathogenic | -2.404 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/T | 0.8617 | likely_pathogenic | 0.8672 | pathogenic | -2.094 | Highly Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
L/V | 0.1469 | likely_benign | 0.1419 | benign | -1.147 | Destabilizing | 0.999 | D | 0.474 | neutral | D | 0.525944358 | None | None | N |
L/W | 0.7867 | likely_pathogenic | 0.7893 | pathogenic | -1.369 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/Y | 0.8864 | likely_pathogenic | 0.8873 | pathogenic | -1.105 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.