Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28004 | 84235;84236;84237 | chr2:178562122;178562121;178562120 | chr2:179426849;179426848;179426847 |
N2AB | 26363 | 79312;79313;79314 | chr2:178562122;178562121;178562120 | chr2:179426849;179426848;179426847 |
N2A | 25436 | 76531;76532;76533 | chr2:178562122;178562121;178562120 | chr2:179426849;179426848;179426847 |
N2B | 18939 | 57040;57041;57042 | chr2:178562122;178562121;178562120 | chr2:179426849;179426848;179426847 |
Novex-1 | 19064 | 57415;57416;57417 | chr2:178562122;178562121;178562120 | chr2:179426849;179426848;179426847 |
Novex-2 | 19131 | 57616;57617;57618 | chr2:178562122;178562121;178562120 | chr2:179426849;179426848;179426847 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs776987640 | 0.204 | 0.001 | D | 0.253 | 0.084 | 0.255777322467 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.99E-06 | 0 |
K/R | rs776987640 | 0.204 | 0.001 | D | 0.253 | 0.084 | 0.255777322467 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs776987640 | 0.204 | 0.001 | D | 0.253 | 0.084 | 0.255777322467 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46985E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5135 | ambiguous | 0.5038 | ambiguous | 0.042 | Stabilizing | 0.157 | N | 0.533 | neutral | None | None | None | None | N |
K/C | 0.7372 | likely_pathogenic | 0.7344 | pathogenic | -0.445 | Destabilizing | 0.968 | D | 0.645 | neutral | None | None | None | None | N |
K/D | 0.8481 | likely_pathogenic | 0.8249 | pathogenic | -0.276 | Destabilizing | 0.567 | D | 0.466 | neutral | None | None | None | None | N |
K/E | 0.3399 | likely_benign | 0.3362 | benign | -0.28 | Destabilizing | 0.124 | N | 0.529 | neutral | N | 0.48308589 | None | None | N |
K/F | 0.8766 | likely_pathogenic | 0.8492 | pathogenic | -0.277 | Destabilizing | 0.726 | D | 0.617 | neutral | None | None | None | None | N |
K/G | 0.6359 | likely_pathogenic | 0.6015 | pathogenic | -0.098 | Destabilizing | 0.272 | N | 0.483 | neutral | None | None | None | None | N |
K/H | 0.386 | ambiguous | 0.3724 | ambiguous | -0.208 | Destabilizing | 0.909 | D | 0.51 | neutral | None | None | None | None | N |
K/I | 0.4876 | ambiguous | 0.4832 | ambiguous | 0.329 | Stabilizing | 0.497 | N | 0.611 | neutral | N | 0.512118831 | None | None | N |
K/L | 0.4578 | ambiguous | 0.4531 | ambiguous | 0.329 | Stabilizing | 0.157 | N | 0.501 | neutral | None | None | None | None | N |
K/M | 0.3653 | ambiguous | 0.3676 | ambiguous | -0.099 | Destabilizing | 0.968 | D | 0.513 | neutral | None | None | None | None | N |
K/N | 0.7097 | likely_pathogenic | 0.6927 | pathogenic | -0.016 | Destabilizing | 0.497 | N | 0.442 | neutral | N | 0.4949984 | None | None | N |
K/P | 0.7549 | likely_pathogenic | 0.7455 | pathogenic | 0.258 | Stabilizing | 0.726 | D | 0.499 | neutral | None | None | None | None | N |
K/Q | 0.1754 | likely_benign | 0.1742 | benign | -0.133 | Destabilizing | 0.497 | N | 0.475 | neutral | N | 0.49396167 | None | None | N |
K/R | 0.0694 | likely_benign | 0.0681 | benign | -0.117 | Destabilizing | 0.001 | N | 0.253 | neutral | D | 0.533808906 | None | None | N |
K/S | 0.6512 | likely_pathogenic | 0.6374 | pathogenic | -0.361 | Destabilizing | 0.157 | N | 0.491 | neutral | None | None | None | None | N |
K/T | 0.3104 | likely_benign | 0.3251 | benign | -0.243 | Destabilizing | 0.002 | N | 0.299 | neutral | D | 0.532539469 | None | None | N |
K/V | 0.4403 | ambiguous | 0.4393 | ambiguous | 0.258 | Stabilizing | 0.396 | N | 0.457 | neutral | None | None | None | None | N |
K/W | 0.7844 | likely_pathogenic | 0.7331 | pathogenic | -0.396 | Destabilizing | 0.968 | D | 0.669 | neutral | None | None | None | None | N |
K/Y | 0.7619 | likely_pathogenic | 0.7281 | pathogenic | -0.038 | Destabilizing | 0.726 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.