Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28008 | 84247;84248;84249 | chr2:178562110;178562109;178562108 | chr2:179426837;179426836;179426835 |
N2AB | 26367 | 79324;79325;79326 | chr2:178562110;178562109;178562108 | chr2:179426837;179426836;179426835 |
N2A | 25440 | 76543;76544;76545 | chr2:178562110;178562109;178562108 | chr2:179426837;179426836;179426835 |
N2B | 18943 | 57052;57053;57054 | chr2:178562110;178562109;178562108 | chr2:179426837;179426836;179426835 |
Novex-1 | 19068 | 57427;57428;57429 | chr2:178562110;178562109;178562108 | chr2:179426837;179426836;179426835 |
Novex-2 | 19135 | 57628;57629;57630 | chr2:178562110;178562109;178562108 | chr2:179426837;179426836;179426835 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.461 | 0.372 | 0.239305524855 | gnomAD-4.0.0 | 1.59261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8808 | likely_pathogenic | 0.9026 | pathogenic | -0.917 | Destabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | N |
R/C | 0.5762 | likely_pathogenic | 0.6626 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
R/D | 0.9466 | likely_pathogenic | 0.9604 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/E | 0.8487 | likely_pathogenic | 0.8803 | pathogenic | 0.054 | Stabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
R/F | 0.9401 | likely_pathogenic | 0.9528 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
R/G | 0.8242 | likely_pathogenic | 0.867 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.511493498 | None | None | N |
R/H | 0.3121 | likely_benign | 0.3643 | ambiguous | -1.431 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
R/I | 0.8393 | likely_pathogenic | 0.8672 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.523863762 | None | None | N |
R/K | 0.3955 | ambiguous | 0.3917 | ambiguous | -0.884 | Destabilizing | 0.997 | D | 0.461 | neutral | N | 0.475459118 | None | None | N |
R/L | 0.7751 | likely_pathogenic | 0.8008 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
R/M | 0.8479 | likely_pathogenic | 0.8721 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
R/N | 0.9044 | likely_pathogenic | 0.9287 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
R/P | 0.9748 | likely_pathogenic | 0.9813 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
R/Q | 0.3748 | ambiguous | 0.4104 | ambiguous | -0.532 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
R/S | 0.9088 | likely_pathogenic | 0.9288 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.488869793 | None | None | N |
R/T | 0.7908 | likely_pathogenic | 0.8407 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.500226098 | None | None | N |
R/V | 0.872 | likely_pathogenic | 0.8966 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/W | 0.5563 | ambiguous | 0.6095 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
R/Y | 0.8182 | likely_pathogenic | 0.8527 | pathogenic | -0.177 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.