Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2801 | 8626;8627;8628 | chr2:178770300;178770299;178770298 | chr2:179635027;179635026;179635025 |
N2AB | 2801 | 8626;8627;8628 | chr2:178770300;178770299;178770298 | chr2:179635027;179635026;179635025 |
N2A | 2801 | 8626;8627;8628 | chr2:178770300;178770299;178770298 | chr2:179635027;179635026;179635025 |
N2B | 2755 | 8488;8489;8490 | chr2:178770300;178770299;178770298 | chr2:179635027;179635026;179635025 |
Novex-1 | 2755 | 8488;8489;8490 | chr2:178770300;178770299;178770298 | chr2:179635027;179635026;179635025 |
Novex-2 | 2755 | 8488;8489;8490 | chr2:178770300;178770299;178770298 | chr2:179635027;179635026;179635025 |
Novex-3 | 2801 | 8626;8627;8628 | chr2:178770300;178770299;178770298 | chr2:179635027;179635026;179635025 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | None | None | 0.966 | D | 0.739 | 0.397 | 0.356484672536 | gnomAD-4.0.0 | 1.59049E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7982 | likely_pathogenic | 0.8654 | pathogenic | -1.975 | Destabilizing | 0.005 | N | 0.355 | neutral | N | 0.498621765 | None | None | N |
P/C | 0.9843 | likely_pathogenic | 0.9904 | pathogenic | -1.201 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
P/D | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -2.437 | Highly Destabilizing | 0.915 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/E | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -2.289 | Highly Destabilizing | 0.842 | D | 0.653 | neutral | None | None | None | None | N |
P/F | 0.9974 | likely_pathogenic | 0.9983 | pathogenic | -1.243 | Destabilizing | 0.949 | D | 0.767 | deleterious | None | None | None | None | N |
P/G | 0.9882 | likely_pathogenic | 0.9924 | pathogenic | -2.442 | Highly Destabilizing | 0.728 | D | 0.636 | neutral | None | None | None | None | N |
P/H | 0.998 | likely_pathogenic | 0.9984 | pathogenic | -2.168 | Highly Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
P/I | 0.913 | likely_pathogenic | 0.932 | pathogenic | -0.704 | Destabilizing | 0.067 | N | 0.584 | neutral | None | None | None | None | N |
P/K | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -1.733 | Destabilizing | 0.842 | D | 0.645 | neutral | None | None | None | None | N |
P/L | 0.6502 | likely_pathogenic | 0.7473 | pathogenic | -0.704 | Destabilizing | 0.012 | N | 0.493 | neutral | N | 0.445085016 | None | None | N |
P/M | 0.9352 | likely_pathogenic | 0.9602 | pathogenic | -0.478 | Destabilizing | 0.949 | D | 0.696 | prob.neutral | None | None | None | None | N |
P/N | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -1.799 | Destabilizing | 0.974 | D | 0.715 | prob.delet. | None | None | None | None | N |
P/Q | 0.995 | likely_pathogenic | 0.9962 | pathogenic | -1.77 | Destabilizing | 0.966 | D | 0.739 | prob.delet. | D | 0.605008006 | None | None | N |
P/R | 0.9976 | likely_pathogenic | 0.9978 | pathogenic | -1.39 | Destabilizing | 0.966 | D | 0.719 | prob.delet. | D | 0.605008006 | None | None | N |
P/S | 0.9898 | likely_pathogenic | 0.9935 | pathogenic | -2.349 | Highly Destabilizing | 0.669 | D | 0.607 | neutral | D | 0.603708585 | None | None | N |
P/T | 0.9623 | likely_pathogenic | 0.9759 | pathogenic | -2.082 | Highly Destabilizing | 0.051 | N | 0.376 | neutral | D | 0.523610775 | None | None | N |
P/V | 0.8756 | likely_pathogenic | 0.9096 | pathogenic | -1.099 | Destabilizing | 0.525 | D | 0.562 | neutral | None | None | None | None | N |
P/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.733 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
P/Y | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -1.369 | Destabilizing | 0.991 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.