Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28011 | 84256;84257;84258 | chr2:178562101;178562100;178562099 | chr2:179426828;179426827;179426826 |
N2AB | 26370 | 79333;79334;79335 | chr2:178562101;178562100;178562099 | chr2:179426828;179426827;179426826 |
N2A | 25443 | 76552;76553;76554 | chr2:178562101;178562100;178562099 | chr2:179426828;179426827;179426826 |
N2B | 18946 | 57061;57062;57063 | chr2:178562101;178562100;178562099 | chr2:179426828;179426827;179426826 |
Novex-1 | 19071 | 57436;57437;57438 | chr2:178562101;178562100;178562099 | chr2:179426828;179426827;179426826 |
Novex-2 | 19138 | 57637;57638;57639 | chr2:178562101;178562100;178562099 | chr2:179426828;179426827;179426826 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.156 | D | 0.373 | 0.111 | 0.393623145366 | gnomAD-4.0.0 | 1.36889E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99614E-07 | 1.15996E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2404 | likely_benign | 0.2792 | benign | -1.525 | Destabilizing | 0.008 | N | 0.291 | neutral | D | 0.525501641 | None | None | N |
V/C | 0.6443 | likely_pathogenic | 0.6835 | pathogenic | -1.419 | Destabilizing | 0.989 | D | 0.585 | neutral | None | None | None | None | N |
V/D | 0.6975 | likely_pathogenic | 0.7664 | pathogenic | -0.633 | Destabilizing | 0.949 | D | 0.713 | prob.delet. | N | 0.501971203 | None | None | N |
V/E | 0.5879 | likely_pathogenic | 0.6321 | pathogenic | -0.584 | Destabilizing | 0.923 | D | 0.661 | neutral | None | None | None | None | N |
V/F | 0.1315 | likely_benign | 0.164 | benign | -1.163 | Destabilizing | 0.901 | D | 0.603 | neutral | N | 0.517863592 | None | None | N |
V/G | 0.3473 | ambiguous | 0.4325 | ambiguous | -1.883 | Destabilizing | 0.82 | D | 0.665 | neutral | N | 0.515453875 | None | None | N |
V/H | 0.6551 | likely_pathogenic | 0.7168 | pathogenic | -1.305 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/I | 0.0764 | likely_benign | 0.073 | benign | -0.627 | Destabilizing | 0.008 | N | 0.213 | neutral | N | 0.463103601 | None | None | N |
V/K | 0.5362 | ambiguous | 0.5932 | pathogenic | -1.039 | Destabilizing | 0.923 | D | 0.659 | neutral | None | None | None | None | N |
V/L | 0.2485 | likely_benign | 0.2628 | benign | -0.627 | Destabilizing | 0.156 | N | 0.373 | neutral | D | 0.526539004 | None | None | N |
V/M | 0.1713 | likely_benign | 0.1839 | benign | -0.713 | Destabilizing | 0.923 | D | 0.493 | neutral | None | None | None | None | N |
V/N | 0.5106 | ambiguous | 0.5585 | ambiguous | -0.952 | Destabilizing | 0.961 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/P | 0.89 | likely_pathogenic | 0.9372 | pathogenic | -0.892 | Destabilizing | 0.961 | D | 0.667 | neutral | None | None | None | None | N |
V/Q | 0.508 | ambiguous | 0.5624 | ambiguous | -1.003 | Destabilizing | 0.961 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/R | 0.4489 | ambiguous | 0.5352 | ambiguous | -0.68 | Destabilizing | 0.923 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/S | 0.3374 | likely_benign | 0.3859 | ambiguous | -1.669 | Destabilizing | 0.858 | D | 0.621 | neutral | None | None | None | None | N |
V/T | 0.2424 | likely_benign | 0.2629 | benign | -1.472 | Destabilizing | 0.775 | D | 0.455 | neutral | None | None | None | None | N |
V/W | 0.7561 | likely_pathogenic | 0.8163 | pathogenic | -1.271 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/Y | 0.4609 | ambiguous | 0.5279 | ambiguous | -0.974 | Destabilizing | 0.961 | D | 0.604 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.