Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28014 | 84265;84266;84267 | chr2:178562092;178562091;178562090 | chr2:179426819;179426818;179426817 |
N2AB | 26373 | 79342;79343;79344 | chr2:178562092;178562091;178562090 | chr2:179426819;179426818;179426817 |
N2A | 25446 | 76561;76562;76563 | chr2:178562092;178562091;178562090 | chr2:179426819;179426818;179426817 |
N2B | 18949 | 57070;57071;57072 | chr2:178562092;178562091;178562090 | chr2:179426819;179426818;179426817 |
Novex-1 | 19074 | 57445;57446;57447 | chr2:178562092;178562091;178562090 | chr2:179426819;179426818;179426817 |
Novex-2 | 19141 | 57646;57647;57648 | chr2:178562092;178562091;178562090 | chr2:179426819;179426818;179426817 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.008 | N | 0.199 | 0.105 | 0.143124449307 | gnomAD-4.0.0 | 1.59255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43398E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1213 | likely_benign | 0.1246 | benign | -0.423 | Destabilizing | 0.008 | N | 0.199 | neutral | N | 0.510105327 | None | None | N |
S/C | 0.1452 | likely_benign | 0.1517 | benign | -0.3 | Destabilizing | 0.989 | D | 0.47 | neutral | None | None | None | None | N |
S/D | 0.3304 | likely_benign | 0.38 | ambiguous | 0.63 | Stabilizing | 0.775 | D | 0.347 | neutral | None | None | None | None | N |
S/E | 0.5234 | ambiguous | 0.5645 | pathogenic | 0.546 | Stabilizing | 0.775 | D | 0.363 | neutral | None | None | None | None | N |
S/F | 0.2669 | likely_benign | 0.2991 | benign | -1.05 | Destabilizing | 0.961 | D | 0.563 | neutral | None | None | None | None | N |
S/G | 0.0864 | likely_benign | 0.0928 | benign | -0.524 | Destabilizing | 0.633 | D | 0.385 | neutral | None | None | None | None | N |
S/H | 0.3802 | ambiguous | 0.4074 | ambiguous | -0.987 | Destabilizing | 0.996 | D | 0.465 | neutral | None | None | None | None | N |
S/I | 0.2903 | likely_benign | 0.3042 | benign | -0.288 | Destabilizing | 0.858 | D | 0.549 | neutral | None | None | None | None | N |
S/K | 0.6481 | likely_pathogenic | 0.6847 | pathogenic | -0.237 | Destabilizing | 0.775 | D | 0.357 | neutral | None | None | None | None | N |
S/L | 0.1206 | likely_benign | 0.1294 | benign | -0.288 | Destabilizing | 0.565 | D | 0.453 | neutral | N | 0.485581106 | None | None | N |
S/M | 0.2442 | likely_benign | 0.259 | benign | -0.118 | Destabilizing | 0.989 | D | 0.46 | neutral | None | None | None | None | N |
S/N | 0.1345 | likely_benign | 0.1406 | benign | -0.035 | Destabilizing | 0.775 | D | 0.391 | neutral | None | None | None | None | N |
S/P | 0.7006 | likely_pathogenic | 0.7173 | pathogenic | -0.306 | Destabilizing | 0.949 | D | 0.423 | neutral | N | 0.50393885 | None | None | N |
S/Q | 0.5167 | ambiguous | 0.5516 | ambiguous | -0.223 | Destabilizing | 0.961 | D | 0.399 | neutral | None | None | None | None | N |
S/R | 0.6014 | likely_pathogenic | 0.6581 | pathogenic | -0.132 | Destabilizing | 0.923 | D | 0.428 | neutral | None | None | None | None | N |
S/T | 0.072 | likely_benign | 0.0693 | benign | -0.186 | Destabilizing | 0.003 | N | 0.171 | neutral | N | 0.432567263 | None | None | N |
S/V | 0.2665 | likely_benign | 0.2765 | benign | -0.306 | Destabilizing | 0.633 | D | 0.468 | neutral | None | None | None | None | N |
S/W | 0.3965 | ambiguous | 0.4507 | ambiguous | -1.046 | Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
S/Y | 0.2599 | likely_benign | 0.2866 | benign | -0.752 | Destabilizing | 0.961 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.