Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28015 | 84268;84269;84270 | chr2:178562089;178562088;178562087 | chr2:179426816;179426815;179426814 |
N2AB | 26374 | 79345;79346;79347 | chr2:178562089;178562088;178562087 | chr2:179426816;179426815;179426814 |
N2A | 25447 | 76564;76565;76566 | chr2:178562089;178562088;178562087 | chr2:179426816;179426815;179426814 |
N2B | 18950 | 57073;57074;57075 | chr2:178562089;178562088;178562087 | chr2:179426816;179426815;179426814 |
Novex-1 | 19075 | 57448;57449;57450 | chr2:178562089;178562088;178562087 | chr2:179426816;179426815;179426814 |
Novex-2 | 19142 | 57649;57650;57651 | chr2:178562089;178562088;178562087 | chr2:179426816;179426815;179426814 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1457024696 | 0.335 | 0.988 | N | 0.61 | 0.174 | 0.0986583533028 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1457024696 | 0.335 | 0.988 | N | 0.61 | 0.174 | 0.0986583533028 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | N | None | 0 | 2.28896E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2111 | likely_benign | 0.2124 | benign | -0.015 | Destabilizing | 0.968 | D | 0.561 | neutral | None | None | None | None | N |
K/C | 0.6514 | likely_pathogenic | 0.656 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/D | 0.3361 | likely_benign | 0.3246 | benign | -0.165 | Destabilizing | 0.938 | D | 0.566 | neutral | None | None | None | None | N |
K/E | 0.1274 | likely_benign | 0.1295 | benign | -0.175 | Destabilizing | 0.067 | N | 0.289 | neutral | N | 0.412358909 | None | None | N |
K/F | 0.7314 | likely_pathogenic | 0.7271 | pathogenic | -0.371 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
K/G | 0.281 | likely_benign | 0.2846 | benign | -0.138 | Destabilizing | 0.991 | D | 0.514 | neutral | None | None | None | None | N |
K/H | 0.3037 | likely_benign | 0.3046 | benign | -0.232 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
K/I | 0.3572 | ambiguous | 0.3535 | ambiguous | 0.227 | Stabilizing | 0.995 | D | 0.651 | neutral | None | None | None | None | N |
K/L | 0.3048 | likely_benign | 0.3041 | benign | 0.227 | Stabilizing | 0.991 | D | 0.53 | neutral | None | None | None | None | N |
K/M | 0.2342 | likely_benign | 0.2316 | benign | -0.121 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.46335189 | None | None | N |
K/N | 0.2856 | likely_benign | 0.2766 | benign | -0.036 | Destabilizing | 0.988 | D | 0.61 | neutral | N | 0.448799712 | None | None | N |
K/P | 0.302 | likely_benign | 0.3005 | benign | 0.17 | Stabilizing | 0.995 | D | 0.613 | neutral | None | None | None | None | N |
K/Q | 0.1202 | likely_benign | 0.1214 | benign | -0.155 | Destabilizing | 0.976 | D | 0.588 | neutral | N | 0.452706809 | None | None | N |
K/R | 0.0785 | likely_benign | 0.0815 | benign | -0.111 | Destabilizing | 0.958 | D | 0.516 | neutral | N | 0.484683154 | None | None | N |
K/S | 0.2614 | likely_benign | 0.2587 | benign | -0.42 | Destabilizing | 0.968 | D | 0.54 | neutral | None | None | None | None | N |
K/T | 0.1556 | likely_benign | 0.1522 | benign | -0.309 | Destabilizing | 0.988 | D | 0.581 | neutral | N | 0.503711632 | None | None | N |
K/V | 0.2917 | likely_benign | 0.2873 | benign | 0.17 | Stabilizing | 0.995 | D | 0.583 | neutral | None | None | None | None | N |
K/W | 0.7477 | likely_pathogenic | 0.7585 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/Y | 0.5903 | likely_pathogenic | 0.5904 | pathogenic | -0.118 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.