Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28018 | 84277;84278;84279 | chr2:178562080;178562079;178562078 | chr2:179426807;179426806;179426805 |
N2AB | 26377 | 79354;79355;79356 | chr2:178562080;178562079;178562078 | chr2:179426807;179426806;179426805 |
N2A | 25450 | 76573;76574;76575 | chr2:178562080;178562079;178562078 | chr2:179426807;179426806;179426805 |
N2B | 18953 | 57082;57083;57084 | chr2:178562080;178562079;178562078 | chr2:179426807;179426806;179426805 |
Novex-1 | 19078 | 57457;57458;57459 | chr2:178562080;178562079;178562078 | chr2:179426807;179426806;179426805 |
Novex-2 | 19145 | 57658;57659;57660 | chr2:178562080;178562079;178562078 | chr2:179426807;179426806;179426805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.309 | N | 0.617 | 0.152 | 0.152612264143 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1236 | likely_benign | 0.1248 | benign | -1.371 | Destabilizing | 0.309 | N | 0.617 | neutral | N | 0.511464324 | None | None | N |
T/C | 0.4842 | ambiguous | 0.4759 | ambiguous | -1.088 | Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
T/D | 0.936 | likely_pathogenic | 0.9505 | pathogenic | -1.77 | Destabilizing | 0.742 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/E | 0.9443 | likely_pathogenic | 0.9556 | pathogenic | -1.502 | Destabilizing | 0.59 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/F | 0.7175 | likely_pathogenic | 0.7515 | pathogenic | -1.217 | Destabilizing | 0.984 | D | 0.781 | deleterious | None | None | None | None | N |
T/G | 0.5719 | likely_pathogenic | 0.5909 | pathogenic | -1.804 | Destabilizing | 0.742 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/H | 0.8241 | likely_pathogenic | 0.8429 | pathogenic | -1.882 | Destabilizing | 0.987 | D | 0.766 | deleterious | None | None | None | None | N |
T/I | 0.4524 | ambiguous | 0.4958 | ambiguous | -0.2 | Destabilizing | 0.939 | D | 0.772 | deleterious | N | 0.46654144 | None | None | N |
T/K | 0.9345 | likely_pathogenic | 0.9437 | pathogenic | -0.214 | Destabilizing | 0.007 | N | 0.566 | neutral | N | 0.472163754 | None | None | N |
T/L | 0.2746 | likely_benign | 0.299 | benign | -0.2 | Destabilizing | 0.742 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/M | 0.22 | likely_benign | 0.2403 | benign | -0.351 | Destabilizing | 0.996 | D | 0.752 | deleterious | None | None | None | None | N |
T/N | 0.6182 | likely_pathogenic | 0.6588 | pathogenic | -1.179 | Destabilizing | 0.742 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/P | 0.8523 | likely_pathogenic | 0.9049 | pathogenic | -0.563 | Destabilizing | 0.939 | D | 0.774 | deleterious | N | 0.472163754 | None | None | N |
T/Q | 0.8549 | likely_pathogenic | 0.8748 | pathogenic | -0.828 | Destabilizing | 0.91 | D | 0.772 | deleterious | None | None | None | None | N |
T/R | 0.9027 | likely_pathogenic | 0.9226 | pathogenic | -0.642 | Destabilizing | 0.521 | D | 0.755 | deleterious | N | 0.46654144 | None | None | N |
T/S | 0.2009 | likely_benign | 0.2116 | benign | -1.435 | Destabilizing | 0.034 | N | 0.379 | neutral | N | 0.427981723 | None | None | N |
T/V | 0.2813 | likely_benign | 0.305 | benign | -0.563 | Destabilizing | 0.742 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/W | 0.9558 | likely_pathogenic | 0.964 | pathogenic | -1.366 | Destabilizing | 0.996 | D | 0.779 | deleterious | None | None | None | None | N |
T/Y | 0.8235 | likely_pathogenic | 0.843 | pathogenic | -0.947 | Destabilizing | 0.984 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.