Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28024 | 84295;84296;84297 | chr2:178562062;178562061;178562060 | chr2:179426789;179426788;179426787 |
N2AB | 26383 | 79372;79373;79374 | chr2:178562062;178562061;178562060 | chr2:179426789;179426788;179426787 |
N2A | 25456 | 76591;76592;76593 | chr2:178562062;178562061;178562060 | chr2:179426789;179426788;179426787 |
N2B | 18959 | 57100;57101;57102 | chr2:178562062;178562061;178562060 | chr2:179426789;179426788;179426787 |
Novex-1 | 19084 | 57475;57476;57477 | chr2:178562062;178562061;178562060 | chr2:179426789;179426788;179426787 |
Novex-2 | 19151 | 57676;57677;57678 | chr2:178562062;178562061;178562060 | chr2:179426789;179426788;179426787 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs377540780 | -0.417 | 0.002 | N | 0.183 | 0.06 | 0.0611884634855 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
E/D | rs377540780 | -0.417 | 0.002 | N | 0.183 | 0.06 | 0.0611884634855 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.82E-05 | 0 | 0 |
E/D | rs377540780 | -0.417 | 0.002 | N | 0.183 | 0.06 | 0.0611884634855 | gnomAD-4.0.0 | 2.35544E-05 | None | None | None | None | N | None | 2.66994E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88221E-05 | 0 | 3.20318E-05 |
E/G | None | None | 0.822 | N | 0.476 | 0.275 | 0.278143212241 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3239 | likely_benign | 0.3479 | ambiguous | -0.549 | Destabilizing | 0.822 | D | 0.453 | neutral | N | 0.504597067 | None | None | N |
E/C | 0.9412 | likely_pathogenic | 0.9496 | pathogenic | -0.099 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/D | 0.1076 | likely_benign | 0.1089 | benign | -0.485 | Destabilizing | 0.002 | N | 0.183 | neutral | N | 0.4244987 | None | None | N |
E/F | 0.8883 | likely_pathogenic | 0.8971 | pathogenic | -0.374 | Destabilizing | 0.993 | D | 0.628 | neutral | None | None | None | None | N |
E/G | 0.2724 | likely_benign | 0.289 | benign | -0.782 | Destabilizing | 0.822 | D | 0.476 | neutral | N | 0.506501221 | None | None | N |
E/H | 0.7484 | likely_pathogenic | 0.7767 | pathogenic | -0.306 | Destabilizing | 0.993 | D | 0.395 | neutral | None | None | None | None | N |
E/I | 0.7528 | likely_pathogenic | 0.7596 | pathogenic | 0.042 | Stabilizing | 0.978 | D | 0.617 | neutral | None | None | None | None | N |
E/K | 0.4809 | ambiguous | 0.5139 | ambiguous | 0.142 | Stabilizing | 0.822 | D | 0.443 | neutral | N | 0.481218775 | None | None | N |
E/L | 0.72 | likely_pathogenic | 0.7422 | pathogenic | 0.042 | Stabilizing | 0.978 | D | 0.592 | neutral | None | None | None | None | N |
E/M | 0.7473 | likely_pathogenic | 0.7616 | pathogenic | 0.261 | Stabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | N |
E/N | 0.3489 | ambiguous | 0.3771 | ambiguous | -0.21 | Destabilizing | 0.754 | D | 0.407 | neutral | None | None | None | None | N |
E/P | 0.9353 | likely_pathogenic | 0.9405 | pathogenic | -0.134 | Destabilizing | 0.978 | D | 0.422 | neutral | None | None | None | None | N |
E/Q | 0.3529 | ambiguous | 0.377 | ambiguous | -0.162 | Destabilizing | 0.904 | D | 0.4 | neutral | N | 0.49884453 | None | None | N |
E/R | 0.6428 | likely_pathogenic | 0.6666 | pathogenic | 0.336 | Stabilizing | 0.978 | D | 0.393 | neutral | None | None | None | None | N |
E/S | 0.3853 | ambiguous | 0.4117 | ambiguous | -0.393 | Destabilizing | 0.86 | D | 0.41 | neutral | None | None | None | None | N |
E/T | 0.4936 | ambiguous | 0.5287 | ambiguous | -0.203 | Destabilizing | 0.86 | D | 0.417 | neutral | None | None | None | None | N |
E/V | 0.5183 | ambiguous | 0.5417 | ambiguous | -0.134 | Destabilizing | 0.97 | D | 0.489 | neutral | N | 0.486900648 | None | None | N |
E/W | 0.9528 | likely_pathogenic | 0.9565 | pathogenic | -0.191 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/Y | 0.7208 | likely_pathogenic | 0.7342 | pathogenic | -0.128 | Destabilizing | 0.993 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.