Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28027 | 84304;84305;84306 | chr2:178562053;178562052;178562051 | chr2:179426780;179426779;179426778 |
N2AB | 26386 | 79381;79382;79383 | chr2:178562053;178562052;178562051 | chr2:179426780;179426779;179426778 |
N2A | 25459 | 76600;76601;76602 | chr2:178562053;178562052;178562051 | chr2:179426780;179426779;179426778 |
N2B | 18962 | 57109;57110;57111 | chr2:178562053;178562052;178562051 | chr2:179426780;179426779;179426778 |
Novex-1 | 19087 | 57484;57485;57486 | chr2:178562053;178562052;178562051 | chr2:179426780;179426779;179426778 |
Novex-2 | 19154 | 57685;57686;57687 | chr2:178562053;178562052;178562051 | chr2:179426780;179426779;179426778 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1647599149 | None | 0.027 | N | 0.278 | 0.087 | 0.220303561663 | gnomAD-4.0.0 | 3.60101E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93756E-06 | 0 | 0 |
K/N | None | None | None | N | 0.247 | 0.212 | 0.136095386433 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2697 | likely_benign | 0.2578 | benign | 0.038 | Stabilizing | 0.067 | N | 0.308 | neutral | None | None | None | None | N |
K/C | 0.5349 | ambiguous | 0.5301 | ambiguous | -0.4 | Destabilizing | 0.935 | D | 0.299 | neutral | None | None | None | None | N |
K/D | 0.6218 | likely_pathogenic | 0.6252 | pathogenic | -0.168 | Destabilizing | 0.081 | N | 0.308 | neutral | None | None | None | None | N |
K/E | 0.1679 | likely_benign | 0.1694 | benign | -0.17 | Destabilizing | 0.027 | N | 0.278 | neutral | N | 0.495553509 | None | None | N |
K/F | 0.7044 | likely_pathogenic | 0.6741 | pathogenic | -0.25 | Destabilizing | 0.555 | D | 0.295 | neutral | None | None | None | None | N |
K/G | 0.3476 | ambiguous | 0.3441 | ambiguous | -0.114 | Destabilizing | 0.081 | N | 0.317 | neutral | None | None | None | None | N |
K/H | 0.3003 | likely_benign | 0.2951 | benign | -0.227 | Destabilizing | 0.001 | N | 0.232 | neutral | None | None | None | None | N |
K/I | 0.2602 | likely_benign | 0.2425 | benign | 0.358 | Stabilizing | 0.555 | D | 0.313 | neutral | None | None | None | None | N |
K/L | 0.2859 | likely_benign | 0.2676 | benign | 0.358 | Stabilizing | 0.149 | N | 0.322 | neutral | None | None | None | None | N |
K/M | 0.2242 | likely_benign | 0.2127 | benign | -0.028 | Destabilizing | 0.915 | D | 0.309 | neutral | N | 0.460794222 | None | None | N |
K/N | 0.5013 | ambiguous | 0.4867 | ambiguous | 0.046 | Stabilizing | None | N | 0.247 | neutral | N | 0.472822091 | None | None | N |
K/P | 0.4982 | ambiguous | 0.4403 | ambiguous | 0.277 | Stabilizing | 0.555 | D | 0.315 | neutral | None | None | None | None | N |
K/Q | 0.1205 | likely_benign | 0.1198 | benign | -0.085 | Destabilizing | 0.062 | N | 0.281 | neutral | N | 0.460705317 | None | None | N |
K/R | 0.0575 | likely_benign | 0.0577 | benign | -0.069 | Destabilizing | None | N | 0.165 | neutral | N | 0.388828689 | None | None | N |
K/S | 0.398 | ambiguous | 0.3795 | ambiguous | -0.343 | Destabilizing | 0.081 | N | 0.242 | neutral | None | None | None | None | N |
K/T | 0.1969 | likely_benign | 0.1922 | benign | -0.216 | Destabilizing | 0.117 | N | 0.291 | neutral | N | 0.456412903 | None | None | N |
K/V | 0.2531 | likely_benign | 0.2364 | benign | 0.277 | Stabilizing | 0.38 | N | 0.312 | neutral | None | None | None | None | N |
K/W | 0.5667 | likely_pathogenic | 0.5641 | pathogenic | -0.341 | Destabilizing | 0.935 | D | 0.395 | neutral | None | None | None | None | N |
K/Y | 0.5593 | ambiguous | 0.5416 | ambiguous | 0.016 | Stabilizing | 0.38 | N | 0.322 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.