Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28028 | 84307;84308;84309 | chr2:178562050;178562049;178562048 | chr2:179426777;179426776;179426775 |
N2AB | 26387 | 79384;79385;79386 | chr2:178562050;178562049;178562048 | chr2:179426777;179426776;179426775 |
N2A | 25460 | 76603;76604;76605 | chr2:178562050;178562049;178562048 | chr2:179426777;179426776;179426775 |
N2B | 18963 | 57112;57113;57114 | chr2:178562050;178562049;178562048 | chr2:179426777;179426776;179426775 |
Novex-1 | 19088 | 57487;57488;57489 | chr2:178562050;178562049;178562048 | chr2:179426777;179426776;179426775 |
Novex-2 | 19155 | 57688;57689;57690 | chr2:178562050;178562049;178562048 | chr2:179426777;179426776;179426775 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.822 | N | 0.462 | 0.329 | 0.323886383625 | gnomAD-4.0.0 | 5.47518E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19651E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1539 | likely_benign | 0.1438 | benign | -0.277 | Destabilizing | 0.822 | D | 0.468 | neutral | N | 0.461354108 | None | None | N |
E/C | 0.8324 | likely_pathogenic | 0.8235 | pathogenic | 0.135 | Stabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/D | 0.0872 | likely_benign | 0.0811 | benign | -0.164 | Destabilizing | 0.006 | N | 0.187 | neutral | N | 0.442415244 | None | None | N |
E/F | 0.7708 | likely_pathogenic | 0.7399 | pathogenic | -0.311 | Destabilizing | 0.993 | D | 0.656 | neutral | None | None | None | None | N |
E/G | 0.1542 | likely_benign | 0.1488 | benign | -0.439 | Destabilizing | 0.822 | D | 0.462 | neutral | N | 0.510256389 | None | None | N |
E/H | 0.539 | ambiguous | 0.5114 | ambiguous | -0.054 | Destabilizing | 0.978 | D | 0.47 | neutral | None | None | None | None | N |
E/I | 0.4218 | ambiguous | 0.3917 | ambiguous | 0.103 | Stabilizing | 0.978 | D | 0.658 | neutral | None | None | None | None | N |
E/K | 0.2136 | likely_benign | 0.2052 | benign | 0.454 | Stabilizing | 0.698 | D | 0.475 | neutral | N | 0.513488696 | None | None | N |
E/L | 0.4503 | ambiguous | 0.4182 | ambiguous | 0.103 | Stabilizing | 0.956 | D | 0.575 | neutral | None | None | None | None | N |
E/M | 0.498 | ambiguous | 0.473 | ambiguous | 0.243 | Stabilizing | 0.998 | D | 0.622 | neutral | None | None | None | None | N |
E/N | 0.233 | likely_benign | 0.2109 | benign | 0.249 | Stabilizing | 0.754 | D | 0.441 | neutral | None | None | None | None | N |
E/P | 0.6908 | likely_pathogenic | 0.6733 | pathogenic | -0.004 | Destabilizing | 0.978 | D | 0.525 | neutral | None | None | None | None | N |
E/Q | 0.203 | likely_benign | 0.1906 | benign | 0.268 | Stabilizing | 0.822 | D | 0.45 | neutral | N | 0.475699381 | None | None | N |
E/R | 0.3472 | ambiguous | 0.3328 | benign | 0.576 | Stabilizing | 0.043 | N | 0.257 | neutral | None | None | None | None | N |
E/S | 0.2053 | likely_benign | 0.1872 | benign | 0.075 | Stabilizing | 0.86 | D | 0.445 | neutral | None | None | None | None | N |
E/T | 0.2251 | likely_benign | 0.2068 | benign | 0.208 | Stabilizing | 0.956 | D | 0.479 | neutral | None | None | None | None | N |
E/V | 0.2474 | likely_benign | 0.232 | benign | -0.004 | Destabilizing | 0.97 | D | 0.576 | neutral | N | 0.476966829 | None | None | N |
E/W | 0.8719 | likely_pathogenic | 0.8592 | pathogenic | -0.221 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/Y | 0.5985 | likely_pathogenic | 0.5632 | ambiguous | -0.08 | Destabilizing | 0.993 | D | 0.62 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.