Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28037 | 84334;84335;84336 | chr2:178562023;178562022;178562021 | chr2:179426750;179426749;179426748 |
N2AB | 26396 | 79411;79412;79413 | chr2:178562023;178562022;178562021 | chr2:179426750;179426749;179426748 |
N2A | 25469 | 76630;76631;76632 | chr2:178562023;178562022;178562021 | chr2:179426750;179426749;179426748 |
N2B | 18972 | 57139;57140;57141 | chr2:178562023;178562022;178562021 | chr2:179426750;179426749;179426748 |
Novex-1 | 19097 | 57514;57515;57516 | chr2:178562023;178562022;178562021 | chr2:179426750;179426749;179426748 |
Novex-2 | 19164 | 57715;57716;57717 | chr2:178562023;178562022;178562021 | chr2:179426750;179426749;179426748 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs754285119 | -0.671 | 0.002 | N | 0.291 | 0.272 | 0.250579442822 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
V/L | rs754285119 | -0.671 | 0.002 | N | 0.291 | 0.272 | 0.250579442822 | gnomAD-4.0.0 | 2.3269E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.96853E-05 | 0 | 1.65728E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3738 | ambiguous | 0.4248 | ambiguous | -2.169 | Highly Destabilizing | 0.012 | N | 0.345 | neutral | N | 0.383535591 | None | None | N |
V/C | 0.8599 | likely_pathogenic | 0.8606 | pathogenic | -2.327 | Highly Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
V/D | 0.987 | likely_pathogenic | 0.9913 | pathogenic | -2.666 | Highly Destabilizing | 0.966 | D | 0.815 | deleterious | N | 0.514835218 | None | None | N |
V/E | 0.9706 | likely_pathogenic | 0.9801 | pathogenic | -2.472 | Highly Destabilizing | 0.949 | D | 0.786 | deleterious | None | None | None | None | N |
V/F | 0.4731 | ambiguous | 0.5084 | ambiguous | -1.405 | Destabilizing | 0.934 | D | 0.786 | deleterious | N | 0.514581729 | None | None | N |
V/G | 0.6828 | likely_pathogenic | 0.738 | pathogenic | -2.677 | Highly Destabilizing | 0.669 | D | 0.767 | deleterious | N | 0.515730151 | None | None | N |
V/H | 0.9872 | likely_pathogenic | 0.9905 | pathogenic | -2.275 | Highly Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
V/I | 0.0778 | likely_benign | 0.0757 | benign | -0.761 | Destabilizing | 0.454 | N | 0.586 | neutral | N | 0.495410807 | None | None | N |
V/K | 0.979 | likely_pathogenic | 0.9843 | pathogenic | -1.751 | Destabilizing | 0.949 | D | 0.785 | deleterious | None | None | None | None | N |
V/L | 0.177 | likely_benign | 0.1823 | benign | -0.761 | Destabilizing | 0.002 | N | 0.291 | neutral | N | 0.429745962 | None | None | N |
V/M | 0.3209 | likely_benign | 0.3449 | ambiguous | -1.14 | Destabilizing | 0.949 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/N | 0.9554 | likely_pathogenic | 0.9656 | pathogenic | -2.069 | Highly Destabilizing | 0.974 | D | 0.821 | deleterious | None | None | None | None | N |
V/P | 0.9687 | likely_pathogenic | 0.9749 | pathogenic | -1.204 | Destabilizing | 0.974 | D | 0.803 | deleterious | None | None | None | None | N |
V/Q | 0.9576 | likely_pathogenic | 0.9691 | pathogenic | -1.974 | Destabilizing | 0.974 | D | 0.799 | deleterious | None | None | None | None | N |
V/R | 0.9577 | likely_pathogenic | 0.9685 | pathogenic | -1.546 | Destabilizing | 0.974 | D | 0.82 | deleterious | None | None | None | None | N |
V/S | 0.7899 | likely_pathogenic | 0.8355 | pathogenic | -2.753 | Highly Destabilizing | 0.728 | D | 0.753 | deleterious | None | None | None | None | N |
V/T | 0.6573 | likely_pathogenic | 0.713 | pathogenic | -2.409 | Highly Destabilizing | 0.842 | D | 0.657 | neutral | None | None | None | None | N |
V/W | 0.9888 | likely_pathogenic | 0.9907 | pathogenic | -1.767 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
V/Y | 0.9486 | likely_pathogenic | 0.9546 | pathogenic | -1.435 | Destabilizing | 0.974 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.