Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28038 | 84337;84338;84339 | chr2:178562020;178562019;178562018 | chr2:179426747;179426746;179426745 |
N2AB | 26397 | 79414;79415;79416 | chr2:178562020;178562019;178562018 | chr2:179426747;179426746;179426745 |
N2A | 25470 | 76633;76634;76635 | chr2:178562020;178562019;178562018 | chr2:179426747;179426746;179426745 |
N2B | 18973 | 57142;57143;57144 | chr2:178562020;178562019;178562018 | chr2:179426747;179426746;179426745 |
Novex-1 | 19098 | 57517;57518;57519 | chr2:178562020;178562019;178562018 | chr2:179426747;179426746;179426745 |
Novex-2 | 19165 | 57718;57719;57720 | chr2:178562020;178562019;178562018 | chr2:179426747;179426746;179426745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.698 | D | 0.605 | 0.381 | 0.60194832725 | gnomAD-4.0.0 | 6.84367E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99535E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0853 | likely_benign | 0.0826 | benign | -0.594 | Destabilizing | 0.489 | N | 0.375 | neutral | N | 0.466565193 | None | None | I |
S/C | 0.1174 | likely_benign | 0.1142 | benign | -0.496 | Destabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | I |
S/D | 0.4183 | ambiguous | 0.4004 | ambiguous | -0.786 | Destabilizing | 0.86 | D | 0.407 | neutral | None | None | None | None | I |
S/E | 0.4082 | ambiguous | 0.3936 | ambiguous | -0.845 | Destabilizing | 0.86 | D | 0.404 | neutral | None | None | None | None | I |
S/F | 0.1867 | likely_benign | 0.1864 | benign | -1.152 | Destabilizing | 0.978 | D | 0.665 | neutral | None | None | None | None | I |
S/G | 0.1335 | likely_benign | 0.1276 | benign | -0.745 | Destabilizing | 0.86 | D | 0.393 | neutral | None | None | None | None | I |
S/H | 0.2946 | likely_benign | 0.2803 | benign | -1.348 | Destabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | I |
S/I | 0.1909 | likely_benign | 0.1781 | benign | -0.31 | Destabilizing | 0.956 | D | 0.61 | neutral | None | None | None | None | I |
S/K | 0.5609 | ambiguous | 0.5368 | ambiguous | -0.682 | Destabilizing | 0.86 | D | 0.402 | neutral | None | None | None | None | I |
S/L | 0.1114 | likely_benign | 0.1123 | benign | -0.31 | Destabilizing | 0.698 | D | 0.605 | neutral | D | 0.531037959 | None | None | I |
S/M | 0.1887 | likely_benign | 0.1804 | benign | 0.197 | Stabilizing | 0.998 | D | 0.555 | neutral | None | None | None | None | I |
S/N | 0.1496 | likely_benign | 0.14 | benign | -0.619 | Destabilizing | 0.86 | D | 0.427 | neutral | None | None | None | None | I |
S/P | 0.9197 | likely_pathogenic | 0.9198 | pathogenic | -0.376 | Destabilizing | 0.97 | D | 0.505 | neutral | N | 0.504116661 | None | None | I |
S/Q | 0.38 | ambiguous | 0.3661 | ambiguous | -0.975 | Destabilizing | 0.978 | D | 0.499 | neutral | None | None | None | None | I |
S/R | 0.4771 | ambiguous | 0.4628 | ambiguous | -0.402 | Destabilizing | 0.956 | D | 0.513 | neutral | None | None | None | None | I |
S/T | 0.0716 | likely_benign | 0.0682 | benign | -0.623 | Destabilizing | 0.002 | N | 0.189 | neutral | N | 0.392219363 | None | None | I |
S/V | 0.1813 | likely_benign | 0.1681 | benign | -0.376 | Destabilizing | 0.754 | D | 0.597 | neutral | None | None | None | None | I |
S/W | 0.3479 | ambiguous | 0.3537 | ambiguous | -1.123 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | I |
S/Y | 0.1899 | likely_benign | 0.183 | benign | -0.835 | Destabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.