Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28043 | 84352;84353;84354 | chr2:178562005;178562004;178562003 | chr2:179426732;179426731;179426730 |
N2AB | 26402 | 79429;79430;79431 | chr2:178562005;178562004;178562003 | chr2:179426732;179426731;179426730 |
N2A | 25475 | 76648;76649;76650 | chr2:178562005;178562004;178562003 | chr2:179426732;179426731;179426730 |
N2B | 18978 | 57157;57158;57159 | chr2:178562005;178562004;178562003 | chr2:179426732;179426731;179426730 |
Novex-1 | 19103 | 57532;57533;57534 | chr2:178562005;178562004;178562003 | chr2:179426732;179426731;179426730 |
Novex-2 | 19170 | 57733;57734;57735 | chr2:178562005;178562004;178562003 | chr2:179426732;179426731;179426730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | rs764567496 | -0.46 | 0.295 | N | 0.59 | 0.335 | 0.646638679674 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0871 | likely_benign | 0.0901 | benign | -0.527 | Destabilizing | None | N | 0.165 | neutral | D | 0.524285345 | None | None | I |
S/C | 0.1077 | likely_benign | 0.1089 | benign | -0.33 | Destabilizing | 0.295 | N | 0.521 | neutral | N | 0.511954247 | None | None | I |
S/D | 0.2565 | likely_benign | 0.2635 | benign | 0.083 | Stabilizing | 0.072 | N | 0.383 | neutral | None | None | None | None | I |
S/E | 0.2937 | likely_benign | 0.293 | benign | -0.012 | Destabilizing | 0.072 | N | 0.359 | neutral | None | None | None | None | I |
S/F | 0.1714 | likely_benign | 0.1878 | benign | -1.122 | Destabilizing | 0.295 | N | 0.585 | neutral | D | 0.533656977 | None | None | I |
S/G | 0.1114 | likely_benign | 0.1175 | benign | -0.635 | Destabilizing | 0.016 | N | 0.367 | neutral | None | None | None | None | I |
S/H | 0.2388 | likely_benign | 0.24 | benign | -1.171 | Destabilizing | 0.628 | D | 0.521 | neutral | None | None | None | None | I |
S/I | 0.1339 | likely_benign | 0.1341 | benign | -0.368 | Destabilizing | 0.038 | N | 0.567 | neutral | None | None | None | None | I |
S/K | 0.4165 | ambiguous | 0.422 | ambiguous | -0.51 | Destabilizing | 0.072 | N | 0.371 | neutral | None | None | None | None | I |
S/L | 0.0998 | likely_benign | 0.1047 | benign | -0.368 | Destabilizing | 0.016 | N | 0.553 | neutral | None | None | None | None | I |
S/M | 0.1544 | likely_benign | 0.1545 | benign | 0.001 | Stabilizing | 0.356 | N | 0.537 | neutral | None | None | None | None | I |
S/N | 0.092 | likely_benign | 0.0895 | benign | -0.233 | Destabilizing | 0.072 | N | 0.443 | neutral | None | None | None | None | I |
S/P | 0.5739 | likely_pathogenic | 0.6146 | pathogenic | -0.394 | Destabilizing | None | N | 0.276 | neutral | N | 0.500344452 | None | None | I |
S/Q | 0.3078 | likely_benign | 0.3067 | benign | -0.528 | Destabilizing | 0.356 | N | 0.48 | neutral | None | None | None | None | I |
S/R | 0.38 | ambiguous | 0.3923 | ambiguous | -0.292 | Destabilizing | 0.214 | N | 0.564 | neutral | None | None | None | None | I |
S/T | 0.0655 | likely_benign | 0.0635 | benign | -0.368 | Destabilizing | None | N | 0.165 | neutral | N | 0.456580273 | None | None | I |
S/V | 0.1337 | likely_benign | 0.1319 | benign | -0.394 | Destabilizing | None | N | 0.365 | neutral | None | None | None | None | I |
S/W | 0.3289 | likely_benign | 0.3674 | ambiguous | -1.082 | Destabilizing | 0.864 | D | 0.587 | neutral | None | None | None | None | I |
S/Y | 0.1623 | likely_benign | 0.1757 | benign | -0.821 | Destabilizing | 0.295 | N | 0.59 | neutral | N | 0.500344452 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.