Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28044 | 84355;84356;84357 | chr2:178562002;178562001;178562000 | chr2:179426729;179426728;179426727 |
N2AB | 26403 | 79432;79433;79434 | chr2:178562002;178562001;178562000 | chr2:179426729;179426728;179426727 |
N2A | 25476 | 76651;76652;76653 | chr2:178562002;178562001;178562000 | chr2:179426729;179426728;179426727 |
N2B | 18979 | 57160;57161;57162 | chr2:178562002;178562001;178562000 | chr2:179426729;179426728;179426727 |
Novex-1 | 19104 | 57535;57536;57537 | chr2:178562002;178562001;178562000 | chr2:179426729;179426728;179426727 |
Novex-2 | 19171 | 57736;57737;57738 | chr2:178562002;178562001;178562000 | chr2:179426729;179426728;179426727 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs369062122 | -0.45 | None | N | 0.116 | 0.097 | 0.214338557667 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/L | rs369062122 | -0.45 | None | N | 0.116 | 0.097 | 0.214338557667 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20616E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/L | rs369062122 | -0.45 | None | N | 0.116 | 0.097 | 0.214338557667 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
I/L | rs369062122 | -0.45 | None | N | 0.116 | 0.097 | 0.214338557667 | gnomAD-4.0.0 | 6.81736E-06 | None | None | None | None | N | None | 7.99637E-05 | 0 | None | 0 | 8.93895E-05 | None | 0 | 0 | 0 | 0 | 1.60092E-05 |
I/M | None | None | 0.001 | N | 0.285 | 0.048 | 0.390060412749 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43324E-05 | 0 |
I/T | rs1004500080 | -1.05 | None | N | 0.183 | 0.086 | 0.33340067248 | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1004500080 | -1.05 | None | N | 0.183 | 0.086 | 0.33340067248 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1004500080 | -1.05 | None | N | 0.183 | 0.086 | 0.33340067248 | gnomAD-4.0.0 | 5.57836E-06 | None | None | None | None | N | None | 8.0094E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54302E-06 | 0 | 0 |
I/V | rs369062122 | -0.666 | None | N | 0.121 | 0.074 | None | gnomAD-2.1.1 | 2.51E-05 | None | None | None | None | N | None | 1.24059E-04 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 8.02E-05 | 0 | 0 |
I/V | rs369062122 | -0.666 | None | N | 0.121 | 0.074 | None | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 1.44739E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs369062122 | -0.666 | None | N | 0.121 | 0.074 | None | gnomAD-4.0.0 | 8.05747E-06 | None | None | None | None | N | None | 1.06792E-04 | 0 | None | 0 | 0 | None | 3.12598E-05 | 0 | 0 | 3.29424E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1267 | likely_benign | 0.154 | benign | -1.285 | Destabilizing | 0.004 | N | 0.28 | neutral | None | None | None | None | N |
I/C | 0.4517 | ambiguous | 0.4868 | ambiguous | -0.918 | Destabilizing | 0.245 | N | 0.537 | neutral | None | None | None | None | N |
I/D | 0.3263 | likely_benign | 0.3982 | ambiguous | -0.429 | Destabilizing | 0.044 | N | 0.571 | neutral | None | None | None | None | N |
I/E | 0.2596 | likely_benign | 0.303 | benign | -0.458 | Destabilizing | 0.018 | N | 0.487 | neutral | None | None | None | None | N |
I/F | 0.1484 | likely_benign | 0.1676 | benign | -0.963 | Destabilizing | 0.022 | N | 0.453 | neutral | None | None | None | None | N |
I/G | 0.3884 | ambiguous | 0.4756 | ambiguous | -1.562 | Destabilizing | 0.018 | N | 0.487 | neutral | None | None | None | None | N |
I/H | 0.3245 | likely_benign | 0.3713 | ambiguous | -0.807 | Destabilizing | 0.497 | N | 0.593 | neutral | None | None | None | None | N |
I/K | 0.1962 | likely_benign | 0.2274 | benign | -0.766 | Destabilizing | None | N | 0.351 | neutral | N | 0.404591228 | None | None | N |
I/L | 0.0963 | likely_benign | 0.0899 | benign | -0.63 | Destabilizing | None | N | 0.116 | neutral | N | 0.493269005 | None | None | N |
I/M | 0.082 | likely_benign | 0.0818 | benign | -0.551 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.512817558 | None | None | N |
I/N | 0.1328 | likely_benign | 0.1579 | benign | -0.555 | Destabilizing | 0.044 | N | 0.613 | neutral | None | None | None | None | N |
I/P | 0.8481 | likely_pathogenic | 0.8918 | pathogenic | -0.815 | Destabilizing | 0.085 | N | 0.616 | neutral | None | None | None | None | N |
I/Q | 0.2379 | likely_benign | 0.2672 | benign | -0.742 | Destabilizing | 0.044 | N | 0.614 | neutral | None | None | None | None | N |
I/R | 0.1728 | likely_benign | 0.2075 | benign | -0.234 | Destabilizing | 0.017 | N | 0.551 | neutral | N | 0.447131284 | None | None | N |
I/S | 0.1316 | likely_benign | 0.1636 | benign | -1.182 | Destabilizing | 0.009 | N | 0.42 | neutral | None | None | None | None | N |
I/T | 0.0848 | likely_benign | 0.1042 | benign | -1.092 | Destabilizing | None | N | 0.183 | neutral | N | 0.423870422 | None | None | N |
I/V | 0.0585 | likely_benign | 0.0626 | benign | -0.815 | Destabilizing | None | N | 0.121 | neutral | N | 0.43381527 | None | None | N |
I/W | 0.7858 | likely_pathogenic | 0.8059 | pathogenic | -0.98 | Destabilizing | 0.788 | D | 0.595 | neutral | None | None | None | None | N |
I/Y | 0.4177 | ambiguous | 0.429 | ambiguous | -0.742 | Destabilizing | 0.085 | N | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.