Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28045 | 84358;84359;84360 | chr2:178561999;178561998;178561997 | chr2:179426726;179426725;179426724 |
N2AB | 26404 | 79435;79436;79437 | chr2:178561999;178561998;178561997 | chr2:179426726;179426725;179426724 |
N2A | 25477 | 76654;76655;76656 | chr2:178561999;178561998;178561997 | chr2:179426726;179426725;179426724 |
N2B | 18980 | 57163;57164;57165 | chr2:178561999;178561998;178561997 | chr2:179426726;179426725;179426724 |
Novex-1 | 19105 | 57538;57539;57540 | chr2:178561999;178561998;178561997 | chr2:179426726;179426725;179426724 |
Novex-2 | 19172 | 57739;57740;57741 | chr2:178561999;178561998;178561997 | chr2:179426726;179426725;179426724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.326 | N | 0.535 | 0.365 | 0.34854441366 | gnomAD-4.0.0 | 6.84367E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99539E-07 | 0 | 0 |
T/R | rs774026360 | -0.025 | 0.326 | D | 0.573 | 0.307 | 0.387042434762 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/R | rs774026360 | -0.025 | 0.326 | D | 0.573 | 0.307 | 0.387042434762 | gnomAD-4.0.0 | 6.84367E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15969E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0816 | likely_benign | 0.0882 | benign | -0.552 | Destabilizing | 0.001 | N | 0.141 | neutral | N | 0.493952124 | None | None | I |
T/C | 0.3233 | likely_benign | 0.3263 | benign | -0.379 | Destabilizing | 0.972 | D | 0.562 | neutral | None | None | None | None | I |
T/D | 0.3753 | ambiguous | 0.3978 | ambiguous | 0.094 | Stabilizing | 0.561 | D | 0.541 | neutral | None | None | None | None | I |
T/E | 0.31 | likely_benign | 0.3213 | benign | 0.066 | Stabilizing | 0.39 | N | 0.525 | neutral | None | None | None | None | I |
T/F | 0.231 | likely_benign | 0.2405 | benign | -0.794 | Destabilizing | 0.818 | D | 0.573 | neutral | None | None | None | None | I |
T/G | 0.3036 | likely_benign | 0.3168 | benign | -0.765 | Destabilizing | 0.209 | N | 0.492 | neutral | None | None | None | None | I |
T/H | 0.2306 | likely_benign | 0.2424 | benign | -1.045 | Destabilizing | 0.965 | D | 0.543 | neutral | None | None | None | None | I |
T/I | 0.1345 | likely_benign | 0.1265 | benign | -0.096 | Destabilizing | 0.326 | N | 0.535 | neutral | N | 0.513577316 | None | None | I |
T/K | 0.2119 | likely_benign | 0.2164 | benign | -0.57 | Destabilizing | 0.003 | N | 0.279 | neutral | N | 0.484935996 | None | None | I |
T/L | 0.1083 | likely_benign | 0.1099 | benign | -0.096 | Destabilizing | 0.083 | N | 0.442 | neutral | None | None | None | None | I |
T/M | 0.0938 | likely_benign | 0.0954 | benign | 0.027 | Stabilizing | 0.103 | N | 0.363 | neutral | None | None | None | None | I |
T/N | 0.1337 | likely_benign | 0.1371 | benign | -0.439 | Destabilizing | 0.561 | D | 0.468 | neutral | None | None | None | None | I |
T/P | 0.2545 | likely_benign | 0.3157 | benign | -0.216 | Destabilizing | 0.662 | D | 0.611 | neutral | D | 0.531681571 | None | None | I |
T/Q | 0.2444 | likely_benign | 0.2533 | benign | -0.584 | Destabilizing | 0.818 | D | 0.615 | neutral | None | None | None | None | I |
T/R | 0.1688 | likely_benign | 0.1931 | benign | -0.346 | Destabilizing | 0.326 | N | 0.573 | neutral | D | 0.536505281 | None | None | I |
T/S | 0.1045 | likely_benign | 0.1071 | benign | -0.681 | Destabilizing | 0.016 | N | 0.146 | neutral | N | 0.469221496 | None | None | I |
T/V | 0.1049 | likely_benign | 0.0988 | benign | -0.216 | Destabilizing | 0.017 | N | 0.175 | neutral | None | None | None | None | I |
T/W | 0.612 | likely_pathogenic | 0.6313 | pathogenic | -0.781 | Destabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | I |
T/Y | 0.2779 | likely_benign | 0.2926 | benign | -0.522 | Destabilizing | 0.901 | D | 0.561 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.