Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28047 | 84364;84365;84366 | chr2:178561993;178561992;178561991 | chr2:179426720;179426719;179426718 |
N2AB | 26406 | 79441;79442;79443 | chr2:178561993;178561992;178561991 | chr2:179426720;179426719;179426718 |
N2A | 25479 | 76660;76661;76662 | chr2:178561993;178561992;178561991 | chr2:179426720;179426719;179426718 |
N2B | 18982 | 57169;57170;57171 | chr2:178561993;178561992;178561991 | chr2:179426720;179426719;179426718 |
Novex-1 | 19107 | 57544;57545;57546 | chr2:178561993;178561992;178561991 | chr2:179426720;179426719;179426718 |
Novex-2 | 19174 | 57745;57746;57747 | chr2:178561993;178561992;178561991 | chr2:179426720;179426719;179426718 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1390232115 | -0.799 | None | N | 0.209 | 0.109 | 0.228597637076 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
P/S | rs1390232115 | -0.799 | None | N | 0.209 | 0.109 | 0.228597637076 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1176 | likely_benign | 0.1234 | benign | -1.164 | Destabilizing | 0.005 | N | 0.321 | neutral | N | 0.435663496 | None | None | N |
P/C | 0.5472 | ambiguous | 0.5831 | pathogenic | -0.662 | Destabilizing | 0.676 | D | 0.56 | neutral | None | None | None | None | N |
P/D | 0.3417 | ambiguous | 0.3538 | ambiguous | -1.1 | Destabilizing | 0.016 | N | 0.453 | neutral | None | None | None | None | N |
P/E | 0.357 | ambiguous | 0.3692 | ambiguous | -1.164 | Destabilizing | None | N | 0.211 | neutral | None | None | None | None | N |
P/F | 0.5626 | ambiguous | 0.6029 | pathogenic | -1.102 | Destabilizing | 0.214 | N | 0.599 | neutral | None | None | None | None | N |
P/G | 0.2953 | likely_benign | 0.3155 | benign | -1.41 | Destabilizing | None | N | 0.307 | neutral | None | None | None | None | N |
P/H | 0.2808 | likely_benign | 0.3157 | benign | -1.022 | Destabilizing | None | N | 0.349 | neutral | N | 0.441013388 | None | None | N |
P/I | 0.4877 | ambiguous | 0.5036 | ambiguous | -0.615 | Destabilizing | 0.038 | N | 0.582 | neutral | None | None | None | None | N |
P/K | 0.3661 | ambiguous | 0.378 | ambiguous | -1.006 | Destabilizing | 0.016 | N | 0.467 | neutral | None | None | None | None | N |
P/L | 0.2072 | likely_benign | 0.2288 | benign | -0.615 | Destabilizing | None | N | 0.365 | neutral | N | 0.470546861 | None | None | N |
P/M | 0.4475 | ambiguous | 0.4723 | ambiguous | -0.391 | Destabilizing | 0.214 | N | 0.56 | neutral | None | None | None | None | N |
P/N | 0.2554 | likely_benign | 0.2631 | benign | -0.64 | Destabilizing | 0.038 | N | 0.572 | neutral | None | None | None | None | N |
P/Q | 0.2578 | likely_benign | 0.2821 | benign | -0.888 | Destabilizing | 0.072 | N | 0.575 | neutral | None | None | None | None | N |
P/R | 0.2939 | likely_benign | 0.3328 | benign | -0.424 | Destabilizing | 0.055 | N | 0.614 | neutral | N | 0.432335189 | None | None | N |
P/S | 0.1337 | likely_benign | 0.1426 | benign | -1.04 | Destabilizing | None | N | 0.209 | neutral | N | 0.372593453 | None | None | N |
P/T | 0.1637 | likely_benign | 0.1695 | benign | -1.004 | Destabilizing | 0.012 | N | 0.451 | neutral | N | 0.372844169 | None | None | N |
P/V | 0.3589 | ambiguous | 0.3686 | ambiguous | -0.763 | Destabilizing | 0.001 | N | 0.328 | neutral | None | None | None | None | N |
P/W | 0.7276 | likely_pathogenic | 0.7763 | pathogenic | -1.237 | Destabilizing | 0.864 | D | 0.577 | neutral | None | None | None | None | N |
P/Y | 0.5575 | ambiguous | 0.6055 | pathogenic | -0.965 | Destabilizing | 0.12 | N | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.