Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28059 | 84400;84401;84402 | chr2:178561957;178561956;178561955 | chr2:179426684;179426683;179426682 |
N2AB | 26418 | 79477;79478;79479 | chr2:178561957;178561956;178561955 | chr2:179426684;179426683;179426682 |
N2A | 25491 | 76696;76697;76698 | chr2:178561957;178561956;178561955 | chr2:179426684;179426683;179426682 |
N2B | 18994 | 57205;57206;57207 | chr2:178561957;178561956;178561955 | chr2:179426684;179426683;179426682 |
Novex-1 | 19119 | 57580;57581;57582 | chr2:178561957;178561956;178561955 | chr2:179426684;179426683;179426682 |
Novex-2 | 19186 | 57781;57782;57783 | chr2:178561957;178561956;178561955 | chr2:179426684;179426683;179426682 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1228328567 | -2.448 | 0.919 | D | 0.807 | 0.712 | 0.597483089494 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs1228328567 | -2.448 | 0.919 | D | 0.807 | 0.712 | 0.597483089494 | gnomAD-4.0.0 | 3.1859E-06 | None | None | None | None | N | None | 5.66123E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86164E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2985 | likely_benign | 0.1928 | benign | -2.092 | Highly Destabilizing | 0.919 | D | 0.807 | deleterious | D | 0.560759339 | None | None | N |
P/C | 0.8045 | likely_pathogenic | 0.7059 | pathogenic | -2.09 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
P/D | 0.9876 | likely_pathogenic | 0.9757 | pathogenic | -3.276 | Highly Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
P/E | 0.952 | likely_pathogenic | 0.9159 | pathogenic | -3.03 | Highly Destabilizing | 0.995 | D | 0.868 | deleterious | None | None | None | None | N |
P/F | 0.9873 | likely_pathogenic | 0.9715 | pathogenic | -0.966 | Destabilizing | 0.998 | D | 0.949 | deleterious | None | None | None | None | N |
P/G | 0.9282 | likely_pathogenic | 0.8655 | pathogenic | -2.603 | Highly Destabilizing | 0.995 | D | 0.891 | deleterious | None | None | None | None | N |
P/H | 0.9589 | likely_pathogenic | 0.9179 | pathogenic | -2.375 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
P/I | 0.6777 | likely_pathogenic | 0.5262 | ambiguous | -0.635 | Destabilizing | 0.982 | D | 0.906 | deleterious | None | None | None | None | N |
P/K | 0.9635 | likely_pathogenic | 0.936 | pathogenic | -1.622 | Destabilizing | 0.995 | D | 0.87 | deleterious | None | None | None | None | N |
P/L | 0.69 | likely_pathogenic | 0.5413 | ambiguous | -0.635 | Destabilizing | 0.976 | D | 0.882 | deleterious | D | 0.598339653 | None | None | N |
P/M | 0.8831 | likely_pathogenic | 0.778 | pathogenic | -1.187 | Destabilizing | 0.999 | D | 0.923 | deleterious | None | None | None | None | N |
P/N | 0.9784 | likely_pathogenic | 0.9536 | pathogenic | -2.157 | Highly Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | N |
P/Q | 0.9128 | likely_pathogenic | 0.8474 | pathogenic | -1.917 | Destabilizing | 0.998 | D | 0.866 | deleterious | D | 0.538673337 | None | None | N |
P/R | 0.9265 | likely_pathogenic | 0.8788 | pathogenic | -1.607 | Destabilizing | 0.994 | D | 0.917 | deleterious | D | 0.560930783 | None | None | N |
P/S | 0.7746 | likely_pathogenic | 0.6244 | pathogenic | -2.624 | Highly Destabilizing | 0.994 | D | 0.86 | deleterious | D | 0.582088127 | None | None | N |
P/T | 0.441 | ambiguous | 0.2895 | benign | -2.245 | Highly Destabilizing | 0.988 | D | 0.83 | deleterious | D | 0.570433447 | None | None | N |
P/V | 0.417 | ambiguous | 0.2931 | benign | -1.1 | Destabilizing | 0.18 | N | 0.749 | deleterious | None | None | None | None | N |
P/W | 0.9967 | likely_pathogenic | 0.9926 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
P/Y | 0.9912 | likely_pathogenic | 0.9802 | pathogenic | -1.241 | Destabilizing | 0.999 | D | 0.949 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.