Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28062 | 84409;84410;84411 | chr2:178561948;178561947;178561946 | chr2:179426675;179426674;179426673 |
N2AB | 26421 | 79486;79487;79488 | chr2:178561948;178561947;178561946 | chr2:179426675;179426674;179426673 |
N2A | 25494 | 76705;76706;76707 | chr2:178561948;178561947;178561946 | chr2:179426675;179426674;179426673 |
N2B | 18997 | 57214;57215;57216 | chr2:178561948;178561947;178561946 | chr2:179426675;179426674;179426673 |
Novex-1 | 19122 | 57589;57590;57591 | chr2:178561948;178561947;178561946 | chr2:179426675;179426674;179426673 |
Novex-2 | 19189 | 57790;57791;57792 | chr2:178561948;178561947;178561946 | chr2:179426675;179426674;179426673 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs750669319 | -2.256 | 0.062 | N | 0.71 | 0.383 | 0.581692290366 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
I/T | rs750669319 | -2.256 | 0.062 | N | 0.71 | 0.383 | 0.581692290366 | gnomAD-4.0.0 | 4.77742E-06 | None | None | None | None | N | None | 0 | 2.2877E-05 | None | 0 | 0 | None | 0 | 0 | 2.86038E-06 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8078 | likely_pathogenic | 0.7407 | pathogenic | -2.439 | Highly Destabilizing | 0.035 | N | 0.629 | neutral | None | None | None | None | N |
I/C | 0.8597 | likely_pathogenic | 0.8264 | pathogenic | -2.05 | Highly Destabilizing | 0.824 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/D | 0.9902 | likely_pathogenic | 0.9797 | pathogenic | -2.646 | Highly Destabilizing | 0.555 | D | 0.819 | deleterious | None | None | None | None | N |
I/E | 0.9812 | likely_pathogenic | 0.9596 | pathogenic | -2.44 | Highly Destabilizing | 0.555 | D | 0.808 | deleterious | None | None | None | None | N |
I/F | 0.3625 | ambiguous | 0.308 | benign | -1.43 | Destabilizing | 0.38 | N | 0.704 | prob.neutral | None | None | None | None | N |
I/G | 0.9615 | likely_pathogenic | 0.9319 | pathogenic | -2.955 | Highly Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
I/H | 0.97 | likely_pathogenic | 0.9428 | pathogenic | -2.386 | Highly Destabilizing | 0.935 | D | 0.802 | deleterious | None | None | None | None | N |
I/K | 0.9644 | likely_pathogenic | 0.9281 | pathogenic | -1.721 | Destabilizing | 0.484 | N | 0.804 | deleterious | N | 0.513630909 | None | None | N |
I/L | 0.132 | likely_benign | 0.1129 | benign | -0.962 | Destabilizing | None | N | 0.277 | neutral | N | 0.417575515 | None | None | N |
I/M | 0.2017 | likely_benign | 0.1753 | benign | -1.215 | Destabilizing | 0.317 | N | 0.668 | neutral | N | 0.486118905 | None | None | N |
I/N | 0.9087 | likely_pathogenic | 0.8401 | pathogenic | -2.012 | Highly Destabilizing | 0.791 | D | 0.821 | deleterious | None | None | None | None | N |
I/P | 0.8631 | likely_pathogenic | 0.84 | pathogenic | -1.435 | Destabilizing | 0.555 | D | 0.817 | deleterious | None | None | None | None | N |
I/Q | 0.9589 | likely_pathogenic | 0.9213 | pathogenic | -1.908 | Destabilizing | 0.791 | D | 0.815 | deleterious | None | None | None | None | N |
I/R | 0.95 | likely_pathogenic | 0.9022 | pathogenic | -1.498 | Destabilizing | 0.484 | N | 0.821 | deleterious | N | 0.502274603 | None | None | N |
I/S | 0.8905 | likely_pathogenic | 0.8277 | pathogenic | -2.724 | Highly Destabilizing | 0.38 | N | 0.785 | deleterious | None | None | None | None | N |
I/T | 0.813 | likely_pathogenic | 0.7499 | pathogenic | -2.373 | Highly Destabilizing | 0.062 | N | 0.71 | prob.delet. | N | 0.501767624 | None | None | N |
I/V | 0.0756 | likely_benign | 0.0743 | benign | -1.435 | Destabilizing | None | N | 0.22 | neutral | N | 0.396917815 | None | None | N |
I/W | 0.9663 | likely_pathogenic | 0.9498 | pathogenic | -1.733 | Destabilizing | 0.935 | D | 0.806 | deleterious | None | None | None | None | N |
I/Y | 0.8891 | likely_pathogenic | 0.8184 | pathogenic | -1.462 | Destabilizing | 0.555 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.