Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2806384412;84413;84414 chr2:178561945;178561944;178561943chr2:179426672;179426671;179426670
N2AB2642279489;79490;79491 chr2:178561945;178561944;178561943chr2:179426672;179426671;179426670
N2A2549576708;76709;76710 chr2:178561945;178561944;178561943chr2:179426672;179426671;179426670
N2B1899857217;57218;57219 chr2:178561945;178561944;178561943chr2:179426672;179426671;179426670
Novex-11912357592;57593;57594 chr2:178561945;178561944;178561943chr2:179426672;179426671;179426670
Novex-21919057793;57794;57795 chr2:178561945;178561944;178561943chr2:179426672;179426671;179426670
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-92
  • Domain position: 9
  • Structural Position: 11
  • Q(SASA): 0.7438
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs539595292 -0.098 0.964 N 0.408 0.148 0.424908009808 gnomAD-2.1.1 2.51E-05 None None None None N None 4.13E-05 8.51E-05 None 0 0 None 0 None 0 2.35E-05 0
R/C rs539595292 -0.098 0.964 N 0.408 0.148 0.424908009808 gnomAD-3.1.2 1.97E-05 None None None None N None 2.41E-05 0 0 0 0 None 0 0 2.94E-05 0 0
R/C rs539595292 -0.098 0.964 N 0.408 0.148 0.424908009808 1000 genomes 1.99681E-04 None None None None N None 8E-04 0 None None 0 0 None None None 0 None
R/C rs539595292 -0.098 0.964 N 0.408 0.148 0.424908009808 gnomAD-4.0.0 1.42571E-05 None None None None N None 1.33312E-05 5.002E-05 None 0 0 None 0 0 1.44132E-05 1.0981E-05 1.60149E-05
R/H rs570847832 -0.708 None N 0.175 0.179 None gnomAD-2.1.1 8.47E-05 None None None None N None 1.29266E-04 0 None 0 5.61E-05 None 2.61626E-04 None 0 8.92E-05 0
R/H rs570847832 -0.708 None N 0.175 0.179 None gnomAD-3.1.2 3.29E-05 None None None None N None 4.83E-05 0 0 0 0 None 0 0 2.94E-05 0 4.78927E-04
R/H rs570847832 -0.708 None N 0.175 0.179 None 1000 genomes 1.99681E-04 None None None None N None 0 0 None None 0 0 None None None 1E-03 None
R/H rs570847832 -0.708 None N 0.175 0.179 None gnomAD-4.0.0 6.13723E-05 None None None None N None 3.99979E-05 0 None 0 0 None 0 0 7.03769E-05 8.78503E-05 8.00897E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.2327 likely_benign 0.1986 benign -0.542 Destabilizing 0.007 N 0.275 neutral None None None None N
R/C 0.0856 likely_benign 0.0811 benign -0.422 Destabilizing 0.964 D 0.408 neutral N 0.469789076 None None N
R/D 0.3738 ambiguous 0.3206 benign -0.001 Destabilizing 0.031 N 0.365 neutral None None None None N
R/E 0.226 likely_benign 0.1893 benign 0.108 Stabilizing 0.007 N 0.245 neutral None None None None N
R/F 0.2749 likely_benign 0.2506 benign -0.49 Destabilizing 0.214 N 0.501 neutral None None None None N
R/G 0.2039 likely_benign 0.1591 benign -0.838 Destabilizing 0.03 N 0.328 neutral N 0.476764062 None None N
R/H 0.0608 likely_benign 0.0613 benign -1.277 Destabilizing None N 0.175 neutral N 0.505493649 None None N
R/I 0.1377 likely_benign 0.1297 benign 0.24 Stabilizing 0.136 N 0.552 neutral None None None None N
R/K 0.091 likely_benign 0.0787 benign -0.562 Destabilizing None N 0.12 neutral None None None None N
R/L 0.1327 likely_benign 0.1232 benign 0.24 Stabilizing 0.058 N 0.366 neutral N 0.517654869 None None N
R/M 0.1924 likely_benign 0.1678 benign -0.06 Destabilizing 0.356 N 0.475 neutral None None None None N
R/N 0.2459 likely_benign 0.2218 benign -0.03 Destabilizing 0.016 N 0.377 neutral None None None None N
R/P 0.8145 likely_pathogenic 0.7127 pathogenic 0.001 Stabilizing 0.232 N 0.53 neutral N 0.485918322 None None N
R/Q 0.0725 likely_benign 0.0703 benign -0.198 Destabilizing 0.001 N 0.183 neutral None None None None N
R/S 0.2344 likely_benign 0.2028 benign -0.699 Destabilizing 0.001 N 0.2 neutral N 0.45591019 None None N
R/T 0.1346 likely_benign 0.1203 benign -0.414 Destabilizing 0.016 N 0.383 neutral None None None None N
R/V 0.1613 likely_benign 0.159 benign 0.001 Stabilizing 0.072 N 0.46 neutral None None None None N
R/W 0.1495 likely_benign 0.1302 benign -0.239 Destabilizing 0.864 D 0.42 neutral None None None None N
R/Y 0.1833 likely_benign 0.1639 benign 0.091 Stabilizing 0.038 N 0.555 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.