Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28070 | 84433;84434;84435 | chr2:178561924;178561923;178561922 | chr2:179426651;179426650;179426649 |
N2AB | 26429 | 79510;79511;79512 | chr2:178561924;178561923;178561922 | chr2:179426651;179426650;179426649 |
N2A | 25502 | 76729;76730;76731 | chr2:178561924;178561923;178561922 | chr2:179426651;179426650;179426649 |
N2B | 19005 | 57238;57239;57240 | chr2:178561924;178561923;178561922 | chr2:179426651;179426650;179426649 |
Novex-1 | 19130 | 57613;57614;57615 | chr2:178561924;178561923;178561922 | chr2:179426651;179426650;179426649 |
Novex-2 | 19197 | 57814;57815;57816 | chr2:178561924;178561923;178561922 | chr2:179426651;179426650;179426649 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.999 | N | 0.639 | 0.37 | 0.344017737713 | gnomAD-4.0.0 | 6.84334E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9953E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4562 | ambiguous | 0.4295 | ambiguous | -0.636 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.498982921 | None | None | I |
D/C | 0.8263 | likely_pathogenic | 0.8289 | pathogenic | -0.019 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
D/E | 0.2363 | likely_benign | 0.2373 | benign | -0.585 | Destabilizing | 0.767 | D | 0.287 | neutral | N | 0.494604651 | None | None | I |
D/F | 0.8564 | likely_pathogenic | 0.8438 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
D/G | 0.3685 | ambiguous | 0.3446 | ambiguous | -0.872 | Destabilizing | 0.998 | D | 0.673 | neutral | N | 0.483498785 | None | None | I |
D/H | 0.5254 | ambiguous | 0.5345 | ambiguous | -0.989 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.484005764 | None | None | I |
D/I | 0.7872 | likely_pathogenic | 0.7543 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/K | 0.7067 | likely_pathogenic | 0.6883 | pathogenic | -0.02 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/L | 0.7299 | likely_pathogenic | 0.7209 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/M | 0.8626 | likely_pathogenic | 0.8582 | pathogenic | 0.463 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
D/N | 0.1372 | likely_benign | 0.137 | benign | -0.301 | Destabilizing | 0.999 | D | 0.639 | neutral | N | 0.481480639 | None | None | I |
D/P | 0.9593 | likely_pathogenic | 0.9477 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
D/Q | 0.564 | ambiguous | 0.5646 | pathogenic | -0.275 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | I |
D/R | 0.7261 | likely_pathogenic | 0.7076 | pathogenic | -0.043 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/S | 0.2107 | likely_benign | 0.2065 | benign | -0.466 | Destabilizing | 0.997 | D | 0.605 | neutral | None | None | None | None | I |
D/T | 0.395 | ambiguous | 0.3937 | ambiguous | -0.274 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
D/V | 0.6161 | likely_pathogenic | 0.5699 | pathogenic | -0.219 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | N | 0.499400994 | None | None | I |
D/W | 0.9663 | likely_pathogenic | 0.9666 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
D/Y | 0.5159 | ambiguous | 0.4857 | ambiguous | -0.517 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.515112166 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.