Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28072 | 84439;84440;84441 | chr2:178561918;178561917;178561916 | chr2:179426645;179426644;179426643 |
N2AB | 26431 | 79516;79517;79518 | chr2:178561918;178561917;178561916 | chr2:179426645;179426644;179426643 |
N2A | 25504 | 76735;76736;76737 | chr2:178561918;178561917;178561916 | chr2:179426645;179426644;179426643 |
N2B | 19007 | 57244;57245;57246 | chr2:178561918;178561917;178561916 | chr2:179426645;179426644;179426643 |
Novex-1 | 19132 | 57619;57620;57621 | chr2:178561918;178561917;178561916 | chr2:179426645;179426644;179426643 |
Novex-2 | 19199 | 57820;57821;57822 | chr2:178561918;178561917;178561916 | chr2:179426645;179426644;179426643 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs1475606876 | -2.21 | 0.667 | D | 0.809 | 0.473 | 0.815240669409 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
I/K | rs1475606876 | -2.21 | 0.667 | D | 0.809 | 0.473 | 0.815240669409 | gnomAD-4.0.0 | 1.36865E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52653E-05 | None | 0 | 0 | 8.99514E-07 | 0 | 0 |
I/V | None | None | None | N | 0.189 | 0.06 | 0.239901079897 | gnomAD-4.0.0 | 2.05298E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.82731E-05 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5488 | ambiguous | 0.437 | ambiguous | -2.841 | Highly Destabilizing | 0.072 | N | 0.687 | prob.neutral | None | None | None | None | N |
I/C | 0.6587 | likely_pathogenic | 0.6182 | pathogenic | -2.242 | Highly Destabilizing | 0.909 | D | 0.797 | deleterious | None | None | None | None | N |
I/D | 0.9927 | likely_pathogenic | 0.9858 | pathogenic | -3.138 | Highly Destabilizing | 0.726 | D | 0.828 | deleterious | None | None | None | None | N |
I/E | 0.9846 | likely_pathogenic | 0.9723 | pathogenic | -2.81 | Highly Destabilizing | 0.726 | D | 0.806 | deleterious | None | None | None | None | N |
I/F | 0.4584 | ambiguous | 0.4424 | ambiguous | -1.756 | Destabilizing | 0.567 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/G | 0.936 | likely_pathogenic | 0.8947 | pathogenic | -3.46 | Highly Destabilizing | 0.726 | D | 0.785 | deleterious | None | None | None | None | N |
I/H | 0.9766 | likely_pathogenic | 0.9565 | pathogenic | -3.122 | Highly Destabilizing | 0.968 | D | 0.805 | deleterious | None | None | None | None | N |
I/K | 0.9696 | likely_pathogenic | 0.9391 | pathogenic | -1.999 | Destabilizing | 0.667 | D | 0.809 | deleterious | D | 0.52210406 | None | None | N |
I/L | 0.1269 | likely_benign | 0.1204 | benign | -0.978 | Destabilizing | 0.025 | N | 0.414 | neutral | N | 0.453139244 | None | None | N |
I/M | 0.1109 | likely_benign | 0.115 | benign | -1.295 | Destabilizing | 0.497 | N | 0.677 | prob.neutral | N | 0.483755727 | None | None | N |
I/N | 0.9184 | likely_pathogenic | 0.859 | pathogenic | -2.67 | Highly Destabilizing | 0.89 | D | 0.823 | deleterious | None | None | None | None | N |
I/P | 0.993 | likely_pathogenic | 0.9868 | pathogenic | -1.59 | Destabilizing | 0.726 | D | 0.831 | deleterious | None | None | None | None | N |
I/Q | 0.9619 | likely_pathogenic | 0.9326 | pathogenic | -2.304 | Highly Destabilizing | 0.89 | D | 0.827 | deleterious | None | None | None | None | N |
I/R | 0.9498 | likely_pathogenic | 0.903 | pathogenic | -2.103 | Highly Destabilizing | 0.667 | D | 0.823 | deleterious | D | 0.52210406 | None | None | N |
I/S | 0.7945 | likely_pathogenic | 0.6966 | pathogenic | -3.316 | Highly Destabilizing | 0.567 | D | 0.785 | deleterious | None | None | None | None | N |
I/T | 0.6636 | likely_pathogenic | 0.5246 | ambiguous | -2.811 | Highly Destabilizing | 0.124 | N | 0.765 | deleterious | N | 0.510076191 | None | None | N |
I/V | 0.0581 | likely_benign | 0.0581 | benign | -1.59 | Destabilizing | None | N | 0.189 | neutral | N | 0.385892745 | None | None | N |
I/W | 0.9865 | likely_pathogenic | 0.9807 | pathogenic | -2.042 | Highly Destabilizing | 0.968 | D | 0.798 | deleterious | None | None | None | None | N |
I/Y | 0.9216 | likely_pathogenic | 0.8784 | pathogenic | -1.866 | Destabilizing | 0.726 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.