Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28074 | 84445;84446;84447 | chr2:178561912;178561911;178561910 | chr2:179426639;179426638;179426637 |
N2AB | 26433 | 79522;79523;79524 | chr2:178561912;178561911;178561910 | chr2:179426639;179426638;179426637 |
N2A | 25506 | 76741;76742;76743 | chr2:178561912;178561911;178561910 | chr2:179426639;179426638;179426637 |
N2B | 19009 | 57250;57251;57252 | chr2:178561912;178561911;178561910 | chr2:179426639;179426638;179426637 |
Novex-1 | 19134 | 57625;57626;57627 | chr2:178561912;178561911;178561910 | chr2:179426639;179426638;179426637 |
Novex-2 | 19201 | 57826;57827;57828 | chr2:178561912;178561911;178561910 | chr2:179426639;179426638;179426637 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1202396763 | None | 0.022 | N | 0.224 | 0.092 | 0.381409048467 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1202396763 | None | 0.022 | N | 0.224 | 0.092 | 0.381409048467 | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8591 | likely_pathogenic | 0.7691 | pathogenic | -2.682 | Highly Destabilizing | 0.688 | D | 0.664 | neutral | None | None | None | None | N |
I/C | 0.9094 | likely_pathogenic | 0.8338 | pathogenic | -1.923 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
I/D | 0.999 | likely_pathogenic | 0.9969 | pathogenic | -3.142 | Highly Destabilizing | 0.991 | D | 0.837 | deleterious | None | None | None | None | N |
I/E | 0.9978 | likely_pathogenic | 0.9937 | pathogenic | -2.8 | Highly Destabilizing | 0.991 | D | 0.811 | deleterious | None | None | None | None | N |
I/F | 0.3873 | ambiguous | 0.2682 | benign | -1.634 | Destabilizing | 0.012 | N | 0.4 | neutral | N | 0.477534076 | None | None | N |
I/G | 0.9891 | likely_pathogenic | 0.9735 | pathogenic | -3.316 | Highly Destabilizing | 0.974 | D | 0.805 | deleterious | None | None | None | None | N |
I/H | 0.9946 | likely_pathogenic | 0.9835 | pathogenic | -3.127 | Highly Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
I/K | 0.995 | likely_pathogenic | 0.985 | pathogenic | -1.88 | Destabilizing | 0.974 | D | 0.812 | deleterious | None | None | None | None | N |
I/L | 0.1118 | likely_benign | 0.0967 | benign | -0.768 | Destabilizing | 0.002 | N | 0.199 | neutral | N | 0.338013079 | None | None | N |
I/M | 0.187 | likely_benign | 0.1443 | benign | -1.047 | Destabilizing | 0.934 | D | 0.601 | neutral | N | 0.48384894 | None | None | N |
I/N | 0.9895 | likely_pathogenic | 0.9668 | pathogenic | -2.617 | Highly Destabilizing | 0.989 | D | 0.854 | deleterious | N | 0.50529957 | None | None | N |
I/P | 0.9963 | likely_pathogenic | 0.9918 | pathogenic | -1.397 | Destabilizing | 0.991 | D | 0.85 | deleterious | None | None | None | None | N |
I/Q | 0.9939 | likely_pathogenic | 0.9833 | pathogenic | -2.199 | Highly Destabilizing | 0.991 | D | 0.855 | deleterious | None | None | None | None | N |
I/R | 0.9908 | likely_pathogenic | 0.9739 | pathogenic | -2.097 | Highly Destabilizing | 0.974 | D | 0.85 | deleterious | None | None | None | None | N |
I/S | 0.9732 | likely_pathogenic | 0.9312 | pathogenic | -3.196 | Highly Destabilizing | 0.891 | D | 0.763 | deleterious | N | 0.50529957 | None | None | N |
I/T | 0.9466 | likely_pathogenic | 0.881 | pathogenic | -2.674 | Highly Destabilizing | 0.801 | D | 0.685 | prob.neutral | N | 0.50504608 | None | None | N |
I/V | 0.0863 | likely_benign | 0.0799 | benign | -1.397 | Destabilizing | 0.022 | N | 0.224 | neutral | N | 0.411095047 | None | None | N |
I/W | 0.9901 | likely_pathogenic | 0.974 | pathogenic | -1.98 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
I/Y | 0.9457 | likely_pathogenic | 0.8732 | pathogenic | -1.782 | Destabilizing | 0.904 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.