Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2808 | 8647;8648;8649 | chr2:178770279;178770278;178770277 | chr2:179635006;179635005;179635004 |
N2AB | 2808 | 8647;8648;8649 | chr2:178770279;178770278;178770277 | chr2:179635006;179635005;179635004 |
N2A | 2808 | 8647;8648;8649 | chr2:178770279;178770278;178770277 | chr2:179635006;179635005;179635004 |
N2B | 2762 | 8509;8510;8511 | chr2:178770279;178770278;178770277 | chr2:179635006;179635005;179635004 |
Novex-1 | 2762 | 8509;8510;8511 | chr2:178770279;178770278;178770277 | chr2:179635006;179635005;179635004 |
Novex-2 | 2762 | 8509;8510;8511 | chr2:178770279;178770278;178770277 | chr2:179635006;179635005;179635004 |
Novex-3 | 2808 | 8647;8648;8649 | chr2:178770279;178770278;178770277 | chr2:179635006;179635005;179635004 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2154342769 | None | 0.351 | N | 0.203 | 0.283 | 0.207176502487 | gnomAD-4.0.0 | 1.59048E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3557 | ambiguous | 0.3792 | ambiguous | -0.719 | Destabilizing | 0.101 | N | 0.32 | neutral | N | 0.444804059 | None | None | N |
E/C | 0.9676 | likely_pathogenic | 0.9684 | pathogenic | -0.21 | Destabilizing | 0.983 | D | 0.35 | neutral | None | None | None | None | N |
E/D | 0.6343 | likely_pathogenic | 0.6452 | pathogenic | -0.592 | Destabilizing | 0.351 | N | 0.219 | neutral | N | 0.480585929 | None | None | N |
E/F | 0.9764 | likely_pathogenic | 0.9774 | pathogenic | -0.408 | Destabilizing | 0.716 | D | 0.422 | neutral | None | None | None | None | N |
E/G | 0.5128 | ambiguous | 0.5073 | ambiguous | -0.983 | Destabilizing | 0.001 | N | 0.167 | neutral | D | 0.609271905 | None | None | N |
E/H | 0.9083 | likely_pathogenic | 0.9115 | pathogenic | -0.416 | Destabilizing | 0.94 | D | 0.271 | neutral | None | None | None | None | N |
E/I | 0.7281 | likely_pathogenic | 0.7525 | pathogenic | -0.032 | Destabilizing | 0.129 | N | 0.369 | neutral | None | None | None | None | N |
E/K | 0.5057 | ambiguous | 0.5025 | ambiguous | -0.013 | Destabilizing | 0.351 | N | 0.203 | neutral | N | 0.477670025 | None | None | N |
E/L | 0.7745 | likely_pathogenic | 0.7812 | pathogenic | -0.032 | Destabilizing | 0.001 | N | 0.209 | neutral | None | None | None | None | N |
E/M | 0.8067 | likely_pathogenic | 0.8273 | pathogenic | 0.25 | Stabilizing | 0.061 | N | 0.253 | neutral | None | None | None | None | N |
E/N | 0.8052 | likely_pathogenic | 0.8218 | pathogenic | -0.435 | Destabilizing | 0.418 | N | 0.282 | neutral | None | None | None | None | N |
E/P | 0.8411 | likely_pathogenic | 0.8611 | pathogenic | -0.241 | Destabilizing | 0.94 | D | 0.368 | neutral | None | None | None | None | N |
E/Q | 0.2715 | likely_benign | 0.2909 | benign | -0.369 | Destabilizing | 0.523 | D | 0.296 | neutral | N | 0.514247804 | None | None | N |
E/R | 0.6988 | likely_pathogenic | 0.6877 | pathogenic | 0.208 | Stabilizing | 0.836 | D | 0.289 | neutral | None | None | None | None | N |
E/S | 0.616 | likely_pathogenic | 0.6505 | pathogenic | -0.634 | Destabilizing | 0.418 | N | 0.192 | neutral | None | None | None | None | N |
E/T | 0.6968 | likely_pathogenic | 0.7204 | pathogenic | -0.415 | Destabilizing | 0.418 | N | 0.309 | neutral | None | None | None | None | N |
E/V | 0.5068 | ambiguous | 0.5278 | ambiguous | -0.241 | Destabilizing | 0.003 | N | 0.141 | neutral | N | 0.455463333 | None | None | N |
E/W | 0.9936 | likely_pathogenic | 0.9923 | pathogenic | -0.166 | Destabilizing | 0.983 | D | 0.377 | neutral | None | None | None | None | N |
E/Y | 0.9636 | likely_pathogenic | 0.9605 | pathogenic | -0.151 | Destabilizing | 0.94 | D | 0.374 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.