Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28082 | 84469;84470;84471 | chr2:178561888;178561887;178561886 | chr2:179426615;179426614;179426613 |
N2AB | 26441 | 79546;79547;79548 | chr2:178561888;178561887;178561886 | chr2:179426615;179426614;179426613 |
N2A | 25514 | 76765;76766;76767 | chr2:178561888;178561887;178561886 | chr2:179426615;179426614;179426613 |
N2B | 19017 | 57274;57275;57276 | chr2:178561888;178561887;178561886 | chr2:179426615;179426614;179426613 |
Novex-1 | 19142 | 57649;57650;57651 | chr2:178561888;178561887;178561886 | chr2:179426615;179426614;179426613 |
Novex-2 | 19209 | 57850;57851;57852 | chr2:178561888;178561887;178561886 | chr2:179426615;179426614;179426613 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.884 | N | 0.256 | 0.416 | 0.292062946507 | gnomAD-4.0.0 | 6.84315E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99509E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.475 | ambiguous | 0.4414 | ambiguous | -0.653 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.491905803 | None | None | I |
D/C | 0.8684 | likely_pathogenic | 0.8571 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | I |
D/E | 0.4892 | ambiguous | 0.4317 | ambiguous | -0.784 | Destabilizing | 0.996 | D | 0.469 | neutral | N | 0.488093914 | None | None | I |
D/F | 0.9019 | likely_pathogenic | 0.8833 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
D/G | 0.4643 | ambiguous | 0.468 | ambiguous | -1.019 | Destabilizing | 0.996 | D | 0.605 | neutral | D | 0.53243318 | None | None | I |
D/H | 0.6402 | likely_pathogenic | 0.6295 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | N | 0.511922615 | None | None | I |
D/I | 0.7543 | likely_pathogenic | 0.708 | pathogenic | 0.321 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
D/K | 0.7636 | likely_pathogenic | 0.7324 | pathogenic | -0.615 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | I |
D/L | 0.707 | likely_pathogenic | 0.6607 | pathogenic | 0.321 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
D/M | 0.8695 | likely_pathogenic | 0.846 | pathogenic | 0.852 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
D/N | 0.144 | likely_benign | 0.1398 | benign | -1.0 | Destabilizing | 0.884 | D | 0.256 | neutral | N | 0.479815482 | None | None | I |
D/P | 0.9134 | likely_pathogenic | 0.8905 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
D/Q | 0.7185 | likely_pathogenic | 0.6759 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/R | 0.7607 | likely_pathogenic | 0.7399 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
D/S | 0.2187 | likely_benign | 0.2112 | benign | -1.306 | Destabilizing | 0.997 | D | 0.61 | neutral | None | None | None | None | I |
D/T | 0.2904 | likely_benign | 0.2825 | benign | -1.001 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
D/V | 0.547 | ambiguous | 0.5007 | ambiguous | 0.021 | Stabilizing | 1.0 | D | 0.661 | neutral | N | 0.519809427 | None | None | I |
D/W | 0.9792 | likely_pathogenic | 0.9759 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
D/Y | 0.5912 | likely_pathogenic | 0.566 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.647 | neutral | D | 0.550537435 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.