Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28089 | 84490;84491;84492 | chr2:178561867;178561866;178561865 | chr2:179426594;179426593;179426592 |
N2AB | 26448 | 79567;79568;79569 | chr2:178561867;178561866;178561865 | chr2:179426594;179426593;179426592 |
N2A | 25521 | 76786;76787;76788 | chr2:178561867;178561866;178561865 | chr2:179426594;179426593;179426592 |
N2B | 19024 | 57295;57296;57297 | chr2:178561867;178561866;178561865 | chr2:179426594;179426593;179426592 |
Novex-1 | 19149 | 57670;57671;57672 | chr2:178561867;178561866;178561865 | chr2:179426594;179426593;179426592 |
Novex-2 | 19216 | 57871;57872;57873 | chr2:178561867;178561866;178561865 | chr2:179426594;179426593;179426592 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.999 | N | 0.528 | 0.343 | 0.239305524855 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7297 | likely_pathogenic | 0.6863 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
N/C | 0.4715 | ambiguous | 0.3933 | ambiguous | -0.457 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
N/D | 0.7221 | likely_pathogenic | 0.6996 | pathogenic | -1.422 | Destabilizing | 0.999 | D | 0.561 | neutral | N | 0.483877179 | None | None | N |
N/E | 0.9617 | likely_pathogenic | 0.9543 | pathogenic | -1.269 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
N/F | 0.9516 | likely_pathogenic | 0.9301 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
N/G | 0.4981 | ambiguous | 0.4606 | ambiguous | -1.513 | Destabilizing | 0.999 | D | 0.526 | neutral | None | None | None | None | N |
N/H | 0.2756 | likely_benign | 0.2306 | benign | -1.055 | Destabilizing | 1.0 | D | 0.672 | neutral | N | 0.472520874 | None | None | N |
N/I | 0.9289 | likely_pathogenic | 0.9104 | pathogenic | -0.228 | Destabilizing | 1.0 | D | 0.887 | deleterious | N | 0.513364193 | None | None | N |
N/K | 0.9076 | likely_pathogenic | 0.8835 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.469999205 | None | None | N |
N/L | 0.8422 | likely_pathogenic | 0.813 | pathogenic | -0.228 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
N/M | 0.9145 | likely_pathogenic | 0.8948 | pathogenic | 0.186 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
N/P | 0.9856 | likely_pathogenic | 0.9848 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
N/Q | 0.8536 | likely_pathogenic | 0.8224 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
N/R | 0.8407 | likely_pathogenic | 0.8084 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
N/S | 0.1429 | likely_benign | 0.1306 | benign | -1.213 | Destabilizing | 0.999 | D | 0.528 | neutral | N | 0.494948581 | None | None | N |
N/T | 0.607 | likely_pathogenic | 0.5726 | pathogenic | -0.869 | Destabilizing | 0.999 | D | 0.628 | neutral | N | 0.482636185 | None | None | N |
N/V | 0.8981 | likely_pathogenic | 0.875 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
N/W | 0.9789 | likely_pathogenic | 0.9677 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
N/Y | 0.6089 | likely_pathogenic | 0.55 | ambiguous | -0.341 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.473268115 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.