Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28094 | 84505;84506;84507 | chr2:178561852;178561851;178561850 | chr2:179426579;179426578;179426577 |
N2AB | 26453 | 79582;79583;79584 | chr2:178561852;178561851;178561850 | chr2:179426579;179426578;179426577 |
N2A | 25526 | 76801;76802;76803 | chr2:178561852;178561851;178561850 | chr2:179426579;179426578;179426577 |
N2B | 19029 | 57310;57311;57312 | chr2:178561852;178561851;178561850 | chr2:179426579;179426578;179426577 |
Novex-1 | 19154 | 57685;57686;57687 | chr2:178561852;178561851;178561850 | chr2:179426579;179426578;179426577 |
Novex-2 | 19221 | 57886;57887;57888 | chr2:178561852;178561851;178561850 | chr2:179426579;179426578;179426577 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs746801951 | -2.376 | 1.0 | N | 0.865 | 0.386 | 0.270001397563 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
K/N | rs746801951 | -2.376 | 1.0 | N | 0.865 | 0.386 | 0.270001397563 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77948E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.999 | N | 0.723 | 0.274 | 0.414539908741 | gnomAD-4.0.0 | 3.18337E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71706E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8969 | likely_pathogenic | 0.8745 | pathogenic | -1.435 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
K/C | 0.838 | likely_pathogenic | 0.8364 | pathogenic | -1.551 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
K/D | 0.9925 | likely_pathogenic | 0.9844 | pathogenic | -2.558 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
K/E | 0.7746 | likely_pathogenic | 0.6531 | pathogenic | -2.229 | Highly Destabilizing | 0.999 | D | 0.744 | deleterious | N | 0.518782242 | None | None | N |
K/F | 0.9647 | likely_pathogenic | 0.9568 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
K/G | 0.9364 | likely_pathogenic | 0.9126 | pathogenic | -1.913 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
K/H | 0.7551 | likely_pathogenic | 0.7088 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
K/I | 0.7791 | likely_pathogenic | 0.7485 | pathogenic | -0.048 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
K/L | 0.7203 | likely_pathogenic | 0.6997 | pathogenic | -0.048 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
K/M | 0.3511 | ambiguous | 0.3534 | ambiguous | -0.465 | Destabilizing | 1.0 | D | 0.824 | deleterious | N | 0.512400978 | None | None | N |
K/N | 0.9571 | likely_pathogenic | 0.9198 | pathogenic | -2.169 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.518782242 | None | None | N |
K/P | 0.9987 | likely_pathogenic | 0.998 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
K/Q | 0.2725 | likely_benign | 0.2422 | benign | -1.728 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.47450911 | None | None | N |
K/R | 0.1285 | likely_benign | 0.1271 | benign | -0.987 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | N | 0.508648597 | None | None | N |
K/S | 0.9262 | likely_pathogenic | 0.8956 | pathogenic | -2.568 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
K/T | 0.7627 | likely_pathogenic | 0.684 | pathogenic | -1.984 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.50138555 | None | None | N |
K/V | 0.7411 | likely_pathogenic | 0.7141 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
K/W | 0.9413 | likely_pathogenic | 0.9151 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
K/Y | 0.8563 | likely_pathogenic | 0.8333 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.